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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:15:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erpetoichthys calabaricus genome assembly, chromosome: 4.
LR536435.2:16262649-16262667
TGTGTGTGTGTGTGTGTGTGTGTTCACCCT16262649GTAATGGGCTAACAAGTTGTCCAGAGGTCGTTCCTGTCTGCGTTCATTG
BOIEO43TR BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIEO43, genomic survey sequence.
CC959541.1:116-134
TATTGTTAATTCCTATATAACTCCGTTGTG116GTAATGGGCTAACAAGTTGCATTATATTGAATATTGGATCTTCATCAAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' linkage group A10 clone KBrB119O22, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC234732.1:125869-125887
TATTGTCAATTCCTATATAAATCCGTTGTG125869GTAATGGGCTAACAAGTTGCATTATAGTGAATATTGGATCTTCATCAAA
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:69523108-69523126
TATTGTCAATTCCTATATAAATCCGTTGTG69523108GTAATGGGCTAACAAGTTGCATTATAGTGAATATTGGATCTTCATCAAA
Brassica napus genome assembly, chromosome: A09.
HG994363.1:53472580-53472598
TATTGTTAATTCCTATATAACTCCGTTGTG53472580GTAATGGGCTAACAAGTTGCATTATATTGAATATTGGATCTTCATCAAA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41639878-41639896
TATTGTTAATTCCTATATAACTCCGTTGTG41639878GTAATGGGCTAACAAGTTGCATTATATTGAATATTGGATCTTCATCAAA
Brassica rapa genome, scaffold: A09.
LR031568.1:57648556-57648574
TATTGTCAATTCCTATATAAATCCGTTGTG57648556GTAATGGGCTAACAAGTTGCATTATAGTGAATATTGGATCTTCATCAAA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50877683-50877701
TATTGTTAATTCCTATATAACTCCGTTGTG50877683GTAATGGGCTAACAAGTTGCATTATATTGAATATTGGATCTTCATCAAA
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:68172061-68172079
TATTGTCAATTCCTATATAAATCCGTTGTG68172061GTAATGGGCTAACAAGTTGCATTATAGTGAATATTGGATCTTCATCAAA
Mythimna vitellina genome assembly, chromosome: 20.
OX438704.1:19507199-19507217
TTGACACAGATTTGTGTGTTGTGTGACTTT19507199GTAATGGGCTAACAAGTTGCTTATAATACAATACATAGAGACACCAGCC
Thalassophryne amazonica genome assembly, chromosome: 5.
LR722970.1:63358658-63358676
GATGTCCTACAGTTAAATGTTGTTCAGTTC63358658CAACTTGTTAGCCCATTACATGCAAGTAAAACTAAGCCCCAAAATGTCT
Exserohilum rostratum strain LWI chromosome 14.
CP111164.1:1134926-1134944
CTTGCCCATCACTCGCTCCATGGGTTCTAG1134926CAACTTGTTAGCCCATTACTTGGGTCCATATGCATGCACTACTCACCCT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 4.
CP124716.1:86066743-86066761
ATTTCTGTTGTATGGTTATTTCCTTATCTT86066743CAACTTGTTAGCCCATTACTTGCCGTTCCGGGCTATGATTTGTCTTACC
Mythimna impura genome assembly, chromosome: 15.
LR990354.1:3736526-3736544
GCCTGGTGTCTACATTTATTGTAATATGTG3736526CAACTTGTTAGCCCATTACAAAATCACACAACACACAAATCTGTGTTAA
Leptopterna dolabrata genome assembly, chromosome: 2.
OX940976.1:58838046-58838064
GTCGGAAAACTGGTAAGATGAAGTTCATCG58838046CAACTTGTTAGCCCATTACCGTGTTTACCAGACTTGCCGCCGTCGGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTAATGGGCTAACAAGTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAATGGGCTAACAAGTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.304 | 0.295 | search_plus_done; http://172.18.8.135:50400/match?q=GTAATGGGCTAACAAGTTG&k=0&no_gap=0&offset=0&limit=50
0.387 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=CAACTTGTTAGCCCATTAC&k=0&no_gap=0&offset=0&limit=40
0.391 | 0.004 | cgi_end;

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