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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 02:42:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 3, clone: LjB16L08, BM1020.
AP006338.2:27184-27203
AGCTAGGGCCATCGTTGTAAAATTATTTCT27184GTACATTGGGTAATGCAGCGTGCAATTTTTCACGTACACACCAGTAATAT
Lotus japonicus genomic DNA, chromosome 3, clone: LjT07E09, TM0293.
AP006336.1:57254-57273
AGCTAGGGCCATCGTTGTAAAATTATTTCT57254GTACATTGGGTAATGCAGCGTGCAATTTTTCACGTACACACCAGTAATAT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:71077930-71077949
AGCTAGGGCCATCGTTGTAAAATTATTTCT71077930GTACATTGGGTAATGCAGCGTGCAATTTTTCACGTATACTCCAGTAATAT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:71215571-71215590
AGCTAGGGCCATCGTTGTAAAATTATTTCT71215571GTACATTGGGTAATGCAGCGTGCAATTTTTCACGTACACACCAGTAATAT
Sequence 4397 from Patent WO2009037329.
GN121501.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 172184 from Patent EP2090662.
HB822970.1:2198-2217
ATATTACTGGAGTATACGTGAAAAATTGCA2198CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 98635 from Patent EP2096177.
HB965960.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 98838 from Patent EP2096177.
HB966163.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 98635 from Patent EP2199304.
HD023370.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 98838 from Patent EP2199304.
HD023573.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 98635 from patent US 8541208.
HJ473499.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 98838 from patent US 8541208.
HJ473596.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Sequence 4397 from patent US 8809059.
HK082291.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Lotus japonicus genomic DNA, chromosome 3, clone: LjB16L08, BM1020.
AP006338.2:89346-89365
ATATTACTGGTGTGTACGTGAAAAATTGCA89346CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Lotus japonicus multifunctional beta-amyrin synthase (AMY2) mRNA, complete cds.
AF478455.1:2209-2228
ATATTACTGGAGTATACGTGAAAAATTGCA2209CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Lotus japonicus genomic DNA, chromosome 3, clone: LjT11L01, TM1658.
AP007265.1:86564-86583
ATATTACTGGTGTGTACGTGAAAAATTGCA86564CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:71381438-71381457
ATATTACTGGTGTGTACGTGAAAAATTGCA71381438CGCTGCATTACCCAATGTACAGAAATAATTTTACAACGATGGCCCTAGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTACATTGGGTAATGCAGCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTACATTGGGTAATGCAGCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.341 | 0.333 | search_plus_done; http://172.18.8.135:50400/match?q=GTACATTGGGTAATGCAGCG&k=0&no_gap=0&offset=0&limit=50
0.654 | 0.313 | search_minus_done; http://172.18.8.135:50400/match?q=CGCTGCATTACCCAATGTAC&k=0&no_gap=0&offset=0&limit=46
0.662 | 0.009 | cgi_end;

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