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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:48:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Muscardinus avellanarius genome assembly, chromosome: 13.
OY726570.1:47393503-47393519
TGCAGGTTGGAGGCCAGCCCCAGCAATTTA47393503GTACGATCCTCAGCAATTTAGCAAGACCCTGTTTCAAATTTTAAAAA
UCRCS04_0001B05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B05, mRNA sequence.
CN181524.1:347-363
TCGCGCTGAAGAACTTGCACGAACTGCTCA347GTACGATCCTCAGCAATTATGTCAACAAAACCAGCATCTTTAAGCAT
UCRCS04_0003I03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0003I03, mRNA sequence.
CN183108.1:337-353
CGCGCTGAAGAACTTGCACGAACTGGCTCA337GTACGATCCTCAGCAATTATGTCAACAAAACCAGCATCTTTAAGCAT
UCRCS07_21E10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-21E10-J19-1-5.b, mRNA sequence.
CX045230.1:329-345
TCGCGCTGAAGAACTTGCACGAACTGCTCA329GTACGATCCTCAGCAATTATGTCAACAAAACCAGCATCTTTAAGCAT
CP-15_F08_064.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-15_F08_064 3', mRNA sequence.
EB684667.1:324-340
TCGCGCTGAAGAACTTGCACGAACTGCTCA324GTACGATCCTCAGCAATTATGTCAACAAAACCAGCATCTTTAAGCAT
CP-25_E11_083.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP-25_E11_083 3', mRNA sequence.
EB685333.1:329-345
TCGCGCTGAAGAACTTGCACGAACTGCTCA329GTACGATCCTCAGCAATTATGTCAACAAAACCAGCATCTTTAAGCAT
Mdfrg3156I18_e6493.b1 Apple_EST_Mdfrg Malus domestica cDNA 3' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1
GO547224.1:422-438
TCCCGCTCCAGAACTGCTTTGAACTGATCA422GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Mdfrt3075A16_e10892.g1 Mdfrt Malus domestica cDNA 5' similar to ref|NP_177501.1| phosphoethanolamine N-methyltransferase -related [Arabidopsis thaliana] pir|H96762 hypothetical protein F6D5.1 [importe
GO559645.1:424-440
TCCCGCTCCAAAACAGCTTTGAACTGATCA424GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Pyrus pyrifolia mRNA, clone: NLE2_14_51, 3' end sequence, expressed in leaf.
HX745239.1:354-370
TCCCGCTCCAGAACTGCTTTGAACTGATCA354GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTCGAGCAT
Pyrus pyrifolia mRNA, clone: NFR1_23_55, 5' end sequence, expressed in fruit.
HX747581.1:415-431
TCCCGCTCCAGAACTGCTTTGAACTGATCA415GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTCGAGCAT
Pyrus pyrifolia mRNA, clone: NFR2_26_02, 5' end sequence, expressed in fruit.
HX750364.1:466-482
TCCCGCTCCAGAACTGCTTTGAACTGATCA466GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTCGAGCAT
Pyrus pyrifolia mRNA, clone: NFW2_25_75, 5' end sequence, expressed in flower bud.
HX763963.1:577-593
TCCCGCTCCAGAACTGCTTTGAACTGATCA577GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTCGAGCAT
Pyrus pyrifolia mRNA, clone: NLE2_33_16, 5' end sequence, expressed in leaf.
HX769379.1:417-433
TCCCGCTCCAGAACTGCTTTGAACTGATCA417GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTCGAGCAT
TSA: Pyrus communis mRNA, contig: lc11.
FX608598.1:499-515
TCCCGCTCCAGAACTGCTTTGAACTGATCA499GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTTGAGCAT
TSA: Pyrus communis mRNA, contig: lc3539.
FX612126.1:326-342
TCCCGCTCCAGAACTGCTTTGAACTGATCA326GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTTGAGCAT
TSA: Myrmica sulcinodis mRNA, contig: comp24625_c0_seq3.
LJ322187.1:1026-1042
AGAGAGTATCTCTCATAATTTAAAGAGAAA1026GTACGATCCTCAGCAATGAGAAATATGACGAGAGAGATGACATTTAG
TSA: Myrmica sulcinodis mRNA, contig: comp24625_c0_seq4.
LJ322188.1:1227-1243
AGAGAGTATCTCTCATAATTTAAAGAGAAA1227GTACGATCCTCAGCAATGAGAAATATGACGAGAGAGATGACATTTAG
PP_LBa0059-L03.R PP_LBa Prunus persica genomic 3', genomic survey sequence.
FI958062.1:316-332
GATTAGCGTAGCCTTATGCAAACCTGATCA316GTACGATCCTCAGCAATGACCTCGTCAAAACCAGCGTCCTTGAGCAT
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:17173522-17173538
GATTAGCGTAGCCTTATGCAAACCTGGTCA17173522GTACGATCCTCAGCAATGACCTCGTCAAAACCAGCGTCCTTGAGCAT
Gossypioides kirkii chromosome KI_05.
CP032247.1:41810699-41810715
TAATTTACTATTGCCTTACGCCTCCTTTGG41810699GTACGATCCTCAGCAATACTACAAAGTGTTTCGTTGTACACATTATA
Swietenia macrophylla isolate HCNGB_00002344 chromosome 18.
CP135568.1:8163431-8163447
GCGATATGAAGATCTATTTGAACCTGATCA8163431GTACGATCCTCAGCAATGACATCAACAAAACCAGCATCTCTAAGCAT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:34609571-34609587
TCCCGCTCCAAAACAGCTTTGAACTGATCA34609571GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143371.1:30853823-30853839
TCCCGCTCCAGAACTGCTTTGAACTGATCG30853823GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:30793188-30793204
TCCCGCTCCAAAACAGCTTTGAACTGATCA30793188GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:27164896-27164912
TCCCGCTCCAAAACTGCTTTGAACTGATCA27164896GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:33928180-33928196
TCCCGCTCCAAAACAGCTTTGAACTGATCA33928180GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:29351235-29351251
TCCCGCTCCAGAACTGCTTTGAACTGATCA29351235GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Malus domestica genome assembly, chromosome: 6.
OU696682.1:34850796-34850812
TCCCGCTCCAAAACAGCTTTGAACTGATCA34850796GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus domestica genome assembly, chromosome: 14.
OU696690.1:30601974-30601990
TCCCGCTCCAGAACTGCTTTGAACTGATCA30601974GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Malus domestica genome assembly, chromosome: 6.
OU744547.1:34496773-34496789
TCCCGCTCCAAAACAGCTTTGAACTGATCA34496773GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus domestica genome assembly, chromosome: 14.
OU744555.1:31274445-31274461
TCCCGCTCCAGAACTGCTTTGAACTGATCG31274445GTACGATCCTCAGCAATGACCTCATCAAAACTAGCGTCCTTGAGCAT
Malus domestica genome assembly, chromosome: 6.
OU744958.1:34496909-34496925
TCCCGCTCCAAAACAGCTTTGAACTGATCA34496909GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus domestica genome assembly, chromosome: 14.
OU744966.1:31396994-31397010
TCCCGCTCCAGAACTGCTTTGAACTGATCA31396994GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Malus domestica genome assembly, chromosome: 6.
OU744996.1:30730937-30730953
TCCCGCTCCAAAACAGCTTTGAACTGATCA30730937GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Malus domestica genome assembly, chromosome: 14.
OU745004.1:31295761-31295777
TCCCGCTCCAGAACTGCTTTGAACTGATCG31295761GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTGAGCAT
Geum urbanum genome assembly, chromosome: 15.
OX327011.1:50324598-50324614
CAAAACATCATTGCATCACGTACCTGATCA50324598GTACGATCCTCAGCAATGACATCATCAAAACCAGCATCCATAAGCAT
Geum urbanum genome assembly, chromosome: 16.
OX327012.1:50268979-50268995
CAAAACATCGTTGCATCACATACCTGATCA50268979GTACGATCCTCAGCAATGACATCATCAAAACCAGCATCCGTAAGCAT
Geum urbanum genome assembly, chromosome: 17.
OX327013.1:47765098-47765114
CAAAACATCGTTGCATCACATACCTGATCA47765098GTACGATCCTCAGCAATGACATCATCAAAACCAACGTCCGTAAGCAT
Comarum palustre genome assembly, chromosome: 20.
OX637591.1:6107997-6108013
AAATAACGTTGCATTTTGCAGACCTGATCA6107997GTACGATCCTCAGCAATGACATCAACAAAACCAGCATCCGTAAGCAT
Rosa rugosa genome assembly, chromosome: 4.
OY288194.1:57039515-57039531
AAATATTGTTGCATCGTGCAGACCTGATCA57039515GTACGATCCTCAGCAATGACATCATCAAAACCAGCATCCGTAAGCAT
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:30397902-30397918
TCCCGCTCCAAAACAGCTTTGAACTGATCA30397902GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Pyrus communis genome assembly, chromosome: 12.
OY757079.1:25373612-25373628
TCCCGCTCCAAAACTGCTTTGAACTGATCA25373612GTACGATCCTCAGCAATGACCTCATCAAAGCCAGCATCCTTGAGCAT
Pyrus communis genome assembly, chromosome: 13.
OY757080.1:25181298-25181314
TCCCGCTCCAGAACTGCTTTGAACTGATCA25181298GTACGATCCTCAGCAATGACCTCATAAAAACCAGCGTCCTTGAGCAT
Potentilla sterilis genome assembly, chromosome: 7.
OY821760.1:50128002-50128018
AAATATCATTGCACTATGCAGACCTGATCA50128002GTACGATCCTCAGCAATGACATCAGCAAAACCAGCATCCGTAAGCAT
Potentilla sterilis genome assembly, chromosome: 12.
OY821765.1:41635822-41635838
AAATATCATTGCACTATGCAGACCTGATCA41635822GTACGATCCTCAGCAATGACATCAACAAAACCAGCATCCATTAGCAT
Dryas octopetala genome assembly, chromosome: 9.
OY992840.1:18947460-18947476
GTTAAACATAGGTTTATGCAGACCTGCTCA18947460GTACGATCCTCAGCAATGACCTCATCAAAACCAGCGTCCTTAAGCAT
Planctomycetes bacterium SRT547 DNA, complete genome.
AP019860.1:1744657-1744673
TTCTCGGTAATGTCTTTTTCATCGAGAATT1744657GTACGATCCTCAGCAATGTTTGTCGCAGAATTGTCGTCGAGTGTTTC
Vibrio astriarenae strain HN897 chromosome 1, complete sequence.
CP047475.1:2783413-2783429
TCAACGTTTTGCGGACCTTCATTTTCGCTA2783413GTACGATCCTCAGCAATTTTGAAAACCTTACTCTCAGCAAGATCAAG
Listeria grayi strain NCTC10812 genome assembly, chromosome: 1.
LR134483.1:1679660-1679676
TTATCTAGTTTTTCCAATTCTTTTCGATAT1679660GTACGATCCTCAGCAATCGTCCCAAAGTTGTAATCGTAAAATACGGA
Maniola jurtina genome assembly, chromosome: 25.
HG995232.1:2543899-2543915
CTGCTACCATTAAACGATTAATGGAAAGAG2543899GTACGATCCTCAGCAATGAGGAATCTATACTAATATTATAAAGAGGA
Harmonia axyridis genome assembly, chromosome: 6.
OU611932.1:36974563-36974579
TTCTACCACAGTATTCATCTAAATCTAATC36974563GTACGATCCTCAGCAATGAAGACTTGATATCCAAAAAAAAGCCTTAA
Erebia ligea genome assembly, chromosome: 24.
OU785243.1:786449-786465
TTTTTTTTTTTGATCGATTGATAGAAAGGG786449GTACGATCCTCAGCAATGCGGAACACGACACAGAGAGTGATATATTT
Limnephilus lunatus genome assembly, chromosome: 6.
OU830597.1:52700599-52700615
GAGTGTCCACCATGGAAATTGGAAATTGAA52700599GTACGATCCTCAGCAATGAGAAACCGACTTGAGAAGAAGAAGAATAA
Limnephilus marmoratus genome assembly, chromosome: 4.
OU862909.1:5410655-5410671
CCTTGTCCACCATGACAATTTGAGAAGCGG5410655GTACGATCCTCAGCAATGAGGAACCGACTTAAGAAGATCTTGAATTA
Limnephilus marmoratus genome assembly, chromosome: 16.
OU862922.1:42151393-42151409
GCCTTGTCTACCATGGAAATTGGAGTGGAG42151393GTACGATCCTCAGCAATGATAAACCGACTTTGGAAGTTTTACTAGGC
Ypsolopha sequella genome assembly, chromosome: Z.
OW203983.1:42841504-42841520
TCCGGATCGGGTTTTGATGCGGTTACCGCT42841504GTACGATCCTCAGCAATGAGACTGGATTATAAAGAAAGAAGAAAAGA
Ypsolopha sequella genome assembly, chromosome: 4.
OW203987.1:9314882-9314898
TACTGAACGGGTTATGATGCGGTTGCCACT9314882GTACGATCCTCAGCAATGAGACATTGATTACAATGAAAGAAGGAAGG
Ypsolopha sequella genome assembly, chromosome: 5.
OW203988.1:19393547-19393563
AATGGGTTACACTTTGATGCGGTTACAACT19393547GTACGATCCTCAGCAATGAAACATGGATTACAAAGAAAGAAGGAAAC
Ypsolopha sequella genome assembly, chromosome: 6.
OW203989.1:26636142-26636158
TACTGAACGGGTTTTGATGCCGTTACCACT26636142GTACGATCCTCAGCAATGGGACAAGAATTATAAAGAAAGAAAGAAGA
Ypsolopha sequella genome assembly, chromosome: 6.
OW203989.1:27110146-27110162
ACTGAACGGGTTTTTTCTGTGGTTACCACT27110146GTACGATCCTCAGCAATGAGACATGGATTATAAAGAAAGAAGGAAGG
Ypsolopha sequella genome assembly, chromosome: 7.
OW203990.1:26124463-26124479
ACTGAACGGGTTTTGATGGGGTGTACCACT26124463GTACGATCCTCAGCAATAAGACATCTTTTACAAAGAAAAAAGAAAGG
Ypsolopha sequella genome assembly, chromosome: 12.
OW203995.1:22430879-22430895
TACTGAACGGGTTTTGATGCGGTTATCACT22430879GTACGATCCTCAGCAATGAGACATGGATTACAAAGAAATTCGGATAA
Ypsolopha sequella genome assembly, chromosome: 18.
OW204001.1:7753126-7753142
TACTTAACGAGTTTTCATGCGGTTACCACC7753126GTACGATCCTCAGCAATGAAACATGAATTACAAAGAAAGACGGAAGG
Ypsolopha sequella genome assembly, chromosome: 18.
OW204001.1:24610221-24610237
TAATGAATGGGTTTTGATGCTGTTACCACT24610221GTACGATCCTCAGCAATGAGACATGGATTACAGAGAAATAGGCAGTG
Ypsolopha sequella genome assembly, chromosome: 27.
OW204010.1:19340426-19340442
CTACTGAACAGGTTTGATGCGGTTACCACT19340426GTACGATCCTCAGCAATGAAACATGTATTACAAAGAAAGAAGGAAGG
Bugulina stolonifera genome assembly, chromosome: 2.
OW285188.1:21886890-21886906
CGGAACTGTCGAGTAGTGATAGCAATGGAA21886890GTACGATCCTCAGCAATGCTTTTAAGCCTCCTAAACCACCGAGTGCT
Glyphotaelius pellucidus genome assembly, chromosome: Z.
OW386542.1:41320538-41320554
TGTCCACCACGGAATTTGATTGGAGTGGGG41320538GTACGATCCTCAGCAATGACATTTGACGTCAGAATGATATAACATTA
Limnephilus auricula genome assembly, chromosome: 8.
OX638396.1:5318964-5318980
GTCTTGTCTACCATGGAAAACGGAGTAAGG5318964GTACGATCCTCAGCAATGAGGAACCGACTTGAGATAACTCATAACTA
Cordilura impudica genome assembly, chromosome: 2.
OY821518.1:175389281-175389297
TTCGATTCATTGGATTTGACGTTAGAATTA175389281GTACGATCCTCAGCAATAGATTCTAAGGTCCTATACCGATTTGCAGA
Aleiodes alternator genome assembly, chromosome: 5.
OY998101.1:2894703-2894719
CTCCATAAGGACACCCTGCTGGAAGAAATG2894703GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGCGAA
Aleiodes alternator genome assembly, chromosome: 14.
OY998110.1:3568100-3568116
CTCCATATGGACACCCTGCTGGAAGAAATG3568100GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes alternator genome assembly, chromosome: 15.
OY998111.1:3654068-3654084
CTCCATAAGGACACCCTGCTGGAAGAAATG3654068GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGCGAA
Aleiodes alternator genome assembly, chromosome: 17.
OY998113.1:8743127-8743143
CTCCATAAGGACACCCTGCTGGAAGAAATG8743127GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes alternator genome assembly, chromosome: 19.
OY998115.1:1958123-1958139
CTCCATAAGGATACCCCGCTGGAAGGAATG1958123GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Agrilus biguttatus genome assembly, chromosome: 3.
OY998119.1:11289791-11289807
AGAAATTCATTTTGTTGAAAAAAAATCTTA11289791GTACGATCCTCAGCAATTGCAGTAACTATAAAGTTTATTGATTGTGT
Aleiodes leptofemur genome assembly, chromosome: 1.
OZ012609.1:10903522-10903538
CTTCATAAGAACACCTTGCTGGAAGAAATG10903522GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes leptofemur genome assembly, chromosome: 2.
OZ012610.1:3365761-3365777
CTCCATAAGGACACCCTGCTGGAAGAAATG3365761GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes leptofemur genome assembly, chromosome: 3.
OZ012611.1:1222581-1222597
CTCCATAAGGACACCCTACTGGAAGAAATG1222581GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes leptofemur genome assembly, chromosome: 5.
OZ012613.1:13438151-13438167
CTCCATAAGGACACCCTGCTGGAAGAAATG13438151GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes leptofemur genome assembly, chromosome: 6.
OZ012614.1:8323690-8323706
CTCCATAAGGACACCCGGCTGGAAAAAATG8323690GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA
Aleiodes leptofemur genome assembly, chromosome: 12.
OZ012620.1:2735773-2735789
CTCCATAAGGACACCCTGCCGGGAGAAATG2735773GTACGATCCTCAGCAATGGTGTTCTTATTCCTCCAAATATACGAGAA
Aleiodes leptofemur genome assembly, chromosome: 15.
OZ012623.1:7259331-7259347
CTCCATAAGGACACCCTGCTGGAAGAAATG7259331GTACGATCCTCAGCAATGGTGTTTTTATTCCTCCAAATATACGAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTACGATCCTCAGCAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTACGATCCTCAGCAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.091 | 1.082 | search_plus_done; http://172.18.8.135:50400/match?q=GTACGATCCTCAGCAAT&k=0&no_gap=0&offset=0&limit=50
1.170 | 0.079 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGCTGAGGATCGTAC&k=0&no_gap=0&offset=0&limit=0
1.170 | 0.000 | cgi_end;

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