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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:12:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 30034 from patent US 9149506.
HL258728.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
Sequence 30034 from patent US 9216205.
HL475557.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
Sequence 30034 from patent US 9255129.
HL631433.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
JP 2015518816-A/25472: MODIFIED POLYNUCLEOTIDES FOR THE PRODUCTION OF ONCOLOGY-RELATED PROTEINS AND PEPTIDES.
HZ265168.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
Sequence 30034 from patent US 9301993.
KH025467.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
Sequence 30034 from patent US 9587003.
KH683159.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
JP 2017197545-A/25472: MODIFIED POLYNUCLEOTIDES FOR THE PRODUCTION OF ONCOLOGY-RELATED PROTEINS AND PEPTIDES.
LZ978077.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
Sequence 30034 from patent US 10501513.
MO605186.1:275-294
CACTCCCTGGCAGAGCCGGTGGAGCCGGAC275GTAGAAGAAGACGGGGAGCCCCTCAGCCAATCGCGGGTGGAGCAGCCCCT
TSA: Musa acuminata AAA Group Unigene6794_B1 mRNA sequence.
JV316664.1:107-126
CTCGTCGCAGCCAAACCCCCGGCGAGGGCA107GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGGTCC
TSA: Musa acuminata AAA Group Unigene93670_NK1 mRNA sequence.
JV426633.1:331-350
CTCGTCGCAGCCAAACCCCCGGCGAGGGCA331GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGTTCC
Musa troglodytarum cultivar karat chromosome 6.
CP097508.1:49526601-49526620
CTCGTCGCAGCCAAGCCCCCGGCGAGGGCA49526601GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCC
Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:38101265-38101284
CTCGTCGCAGCCAAGCCCCCGACGAGGGCA38101265GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCC
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:36923897-36923916
CTCGTCGCAGCCAAGCCCCCGACGAGGGCA36923897GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:37813137-37813156
CTCGTCGCAGCCAAGCCCCCGACGAGGGCA37813137GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCC
Musa schizocarpa genome assembly, chromosome: S06.
LS990921.1:41419870-41419889
CTCGTCGCAGCCAAGCCCCCGGCGAGGGCA41419870GGCTCCCCGTCTTCTTCTACTTCCACGGCGGCGGCTTCTGCATCGGCTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTAGAAGAAGACGGGGAGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAGAAGAAGACGGGGAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.469 | 0.460 | search_plus_done; http://172.18.8.135:50400/match?q=GTAGAAGAAGACGGGGAGCC&k=0&no_gap=0&offset=0&limit=50
0.605 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTCCCCGTCTTCTTCTAC&k=0&no_gap=0&offset=0&limit=42
0.610 | 0.005 | cgi_end;

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