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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 13:43:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chelon labrosus genome assembly, chromosome: 12.
OY741300.1:5489343-5489358
GTCTCCTTGAAGCCAAAGAATGTGATCTAT5489343GTAGCGGCTTATCCCTGAGCCCTCCCACCAGCGGTAGCCTTGTTGG
uncultured Desulfospira sp. isolate 271fe3a7-c87a-42bf-b72a-f39fa9e244f5 genome assembly, chromosome: 1.
OY760175.1:308705-308720
TTCGCCGGCAAGCTTTCCGGTAATGGTGCC308705GTAGCGGCTTATCCCTGCTTTGGTACAGATCACATCATCAAAGCCA
uncultured Desulfospira sp. isolate 9ed84137-6465-4915-be27-a37162875a64 genome assembly, chromosome: 13.
OY762735.1:122401-122416
TTCGCCGGCAAGCTTTCCGGTAATGGTGCC122401GTAGCGGCTTATCCCTGCTTTGGTACAGATCACATCATCAAAGCCA
GQ0081.BR_C23 GQ008: Cambium, phloem and bark of girdled saplings Picea glauca cDNA clone GQ0081_C23 5', mRNA sequence.
CK434295.2:486-501
GATATGCAGGTTTAGCTGCTGCTGATCATG486GTAGCGGCTTATCCCTCTGCGGCTTCTCTGCAGCAGGCACAACTCA
GQ0081.BR.1_C23 GQ008: Cambium, phloem and bark of girdled saplings Picea glauca cDNA clone GQ0081_C23 5', mRNA sequence.
CO472716.2:486-501
GATATGCAGGTTTAGCTGCTGCTGATCATG486GTAGCGGCTTATCCCTCTGCGGCTTCTCTGCAGCAGGCACAACTCA
TSA: Monomorium chinense mRNA, contig: comp31903_c1_seq1.
LI817183.1:54-69
TACTCTCACTTTGACAAATTTACTTTTCCG54GTAGCGGCTTATCCCTCCCCCTTCGCGATCGCGATATCGGAGCTGC
Oryza glaberrima DNA, clone: W0001-9-B08-50C04R1, left end.
FT781602.1:56-71
GTGGGTGGAGAAGCCCAAGGAAGCTAGGCG56GTAGCGGCTTATCCCTGGCAGCGCGTCGCTCCGACTCCAACAACAT
Papaver somniferum cultivar Roxanne chromosome 8.
CP048220.1:194856303-194856318
GCTCCACTTTGGCATGTGCCAATGGCATGT194856303GTAGCGGCTTATCCCTAGGTTTGCATGGCATGGCATGCTCGATTGC
Papaver somniferum cultivar Roxanne chromosome 8.
CP048220.1:194859379-194859394
GCTCCACTTTGGCATGTGCCAATGGCATGT194859379GTAGCGGCTTATCCCTAGGTTTGCATGGCATGGCATGCTCGATTGC
Oryza sativa Japonica Group cultivar Changxianggeng 1813 chromosome 11.
CP101151.1:13400511-13400526
GTGGGTGGAGAAGCCCAAGGAAGCTAGGCG13400511GTAGCGGCTTATCCCTGGCAGCACGTCGCTCCGACTCCAACAACAT
Serratia fonticola strain GS2 chromosome, complete genome.
CP013913.1:1982312-1982327
ATCACTATTCACTTTACCTGCAGCCACTTC1982312GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACTGAAGCATAG
Serratia fonticola strain MS5 chromosome, complete genome.
CP040182.1:1383800-1383815
ATCACTATTCACTTTACCCACTGCCACTTC1383800GTAGCGGCTTATCCCTGGGCGCAACATTTGAGTCACTGAAGCATAG
Serratia fonticola strain CPSE11 chromosome, complete genome.
CP050171.1:3782641-3782656
ATCACTATTCACTTTACCCACTGCCACTTC3782641GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACTGAAGCATAG
Serratia sp. JSRIV006 chromosome, complete genome.
CP074137.1:1183715-1183730
ATCACTATTCACTTTACCTGCAGCCACTTC1183715GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACTGAAGCATAG
Serratia sp. JSRIV004 chromosome, complete genome.
CP074140.1:1370174-1370189
ATCACTATTCACTTTACCTGCAGCCACTTC1370174GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACTGAAGCATAG
Serratia sp. JSRIV002 chromosome, complete genome.
CP074143.1:1233832-1233847
ATCATTATTCACTTTACCTGCAGCCACTTC1233832GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACTGAAGCATAG
Serratia sp. JSRIV001 chromosome, complete genome.
CP074147.1:1165391-1165406
ATCACTATTCACTTTACCTGCAGCCACTTC1165391GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACTGAAGCATAG
Buttiauxella sp. WJP83 chromosome, complete genome.
CP110080.1:934787-934802
ATCGGCGGGGCGTTATCAAATCCGAACACC934787GTAGCGGCTTATCCCTATTTAGATGTCGCCTGGTTACAGGGCATTT
Serratia fonticola strain NEB369 chromosome, complete genome.
CP133586.1:1206230-1206245
ATCACTATTCACTTTACCTGCAGCCACTTC1206230GTAGCGGCTTATCCCTGGCCGCAACATTTGAGTCACGGAAGCATAA
Buttiauxella sp. R73 chromosome, complete genome.
CP133838.1:965970-965985
ATTGGCGGGGCGTTATCAAATCCGAACACC965970GTAGCGGCTTATCCCTATTTAGATGTTGCCTGGTTACAGGGCATTT
Macrobrachium nipponense isolate FS-2020 chromosome 4.
CP062050.1:146892611-146892626
CATATGCTTATGCTACGATATGCTCATGTT146892611GTAGCGGCTTATCCCTTTTATTCAAAAACACATTGAATTCTTGAAT
Cepaea nemoralis haplotype F32 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial.
KC955098.1:14-29
TGTGGATTCGTAG14GTAGCGGCTTATCCCTACTCATTCGTTTAGAGTTAGGAACAGCAGG
Pieris rapae genome assembly, chromosome: 19.
LR990601.1:6311651-6311666
ACTTGTTTGCCTTTTTTTAGTTGAGACATG6311651GTAGCGGCTTATCCCTGTGCTGTGCAGCAGGAATGGAATTTATGAC
Lymantria monacha genome assembly, chromosome: 2.
LR991083.1:4399007-4399022
GCCGAATTTGGGTGGGTTTTTGGTTGATAT4399007GTAGCGGCTTATCCCTATTTTGTAAAGGTCAGGTGTGCTGCTTGCT
Mythimna ferrago genome assembly, chromosome: 14.
OU342687.1:16611516-16611531
GTACTTTACGTGCTAAAACCTGGGCTTATA16611516GTAGCGGCTTATCCCTTCATTAATGTATTCAAGGCACTGAATTTAT
Aelia acuminata genome assembly, chromosome: 1.
OU426978.1:158869564-158869579
CTAGAAATATATAAATAGCACTATTATTTA158869564GTAGCGGCTTATCCCTAATTTGAAAATGTATTGTACTTAAACAATA
Sesia apiformis genome assembly, chromosome: 7.
OU611954.1:15882767-15882782
TAGAGCTGGTGTAGTACCTCAGGGCTTGTG15882767GTAGCGGCTTATCCCTTAGTCGCCTTTTACGACACTCACGCTATTC
Sesia apiformis genome assembly, chromosome: 9.
OU611956.1:5712905-5712920
TAGATGTGGTGTAATTCCTCAGCGCTTGTG5712905GTAGCGGCTTATCCCTTAGTCGCCTTTTATGGTTTATGGGCTGGTG
Sesia apiformis genome assembly, chromosome: 16.
OU611963.1:4363171-4363186
CACTCTTTTAAAGGTTCCTCAGGGCTTGTG4363171GTAGCGGCTTATCCCTTAATCACCATTTACAACATCCAACGGAAGA
Aplidium turbinatum genome assembly, chromosome: 10.
OU964927.1:22169999-22170014
TCCGAACGCAATTCGCTTAGCCCTCGTGGG22169999GTAGCGGCTTATCCCTGGACACCGAGAGCAGAGTAGGCTACTCAGC
Sesia bembeciformis genome assembly, chromosome: 9.
OX031033.1:5059218-5059233
TAGAGGTGGTGTAATTCCTCAGCACTTGTG5059218GTAGCGGCTTATCCCTTAGTCGCCTTTTATGACTCCCACGGGAATA
Sesia bembeciformis genome assembly, chromosome: 12.
OX031036.1:3372114-3372129
TAGAGGTAGTGTGGTTCTTCCGGGCTTGTG3372114GTAGCGGCTTATCCCTTAGTCGCCTTTTACGATAACCACGGAAGGA
Tridacna gigas genome assembly, chromosome: 15.
OX244042.2:31600255-31600270
TTTGTCATCTGGTAAAGGGTTAAGATAGAT31600255GTAGCGGCTTATCCCTTTGTTAAGAGAAGTGGCTAAGAAATTTTGA
Nematopogon swammerdamellus genome assembly, chromosome: 3.
OX336335.1:30321723-30321738
TGCGTGCAGAGTGTCACCGGCATGGTCCCC30321723GTAGCGGCTTATCCCTTCTATCTCCTATACTTTTCTCGCCCGCACA
Nematopogon swammerdamellus genome assembly, chromosome: 24.
OX336357.1:16608325-16608340
TTTAATTTATTTAGTTATACTTTGTCATCT16608325GTAGCGGCTTATCCCTTCCATTGTACACGCTATTACCTCTCACATT
Oscarella lobularis genome assembly, chromosome: 20.
OX382169.1:1995636-1995651
GGGAGGATAGGGAAGCGAATCTTTAGGCAA1995636GTAGCGGCTTATCCCTATGAACGAACTGTGATTTTCACGGCGATAA
Lacanobia wlatinum genome assembly, chromosome: 21.
OX388043.1:14374189-14374204
AATGGCTGACGAAATCATTCACGTCGCGTG14374189GTAGCGGCTTATCCCTACCTATTATTTTGAAAGCAAATGCAAACCC
Idaea dimidiata genome assembly, chromosome: 12.
OX442338.1:4008455-4008470
GTAAATTATTGTTGAGCTCAGTAGGGGATG4008455GTAGCGGCTTATCCCTACAATAAATTATGTTTTGCGGTCGGTCGTC
Rhodophaea formosa genome assembly, chromosome: 9.
OY720212.1:8401310-8401325
GGCTTGACTCCTTACTTAGCAACAGGAACC8401310GTAGCGGCTTATCCCTTCAACACGTTCATAGGTCTTACAGACACCC
Watersipora subatra genome assembly, chromosome: 8.
OY755165.1:34503275-34503290
GTACTAAATATCGGTCATGTACATCATTCT34503275GTAGCGGCTTATCCCTTGTTTCAAAATAGCTACAATTTATGGGAAT
Watersipora subatra genome assembly, chromosome: 8.
OY755165.1:34568533-34568548
GTACTAAATATTGGTCATGTACATCATTCT34568533GTAGCGGCTTATCCCTTGTTTCAAAACAGCTACAATTTATGGGAAT
Sepioteuthis lessoniana genome assembly, chromosome: 21.
OY757924.1:17330006-17330021
TAGCAGCACATAAGACAGAGGACGAATACA17330006GTAGCGGCTTATCCCTTGTGATGGCCCACCTAAGTACTGACACGGT
Sepioteuthis lessoniana genome assembly, chromosome: 21.
OY757924.1:17330106-17330121
TAGCAGCACATAAGACGGAGGACGAATACA17330106GTAGCGGCTTATCCCTTGTGATGGCCTACCTAAGTACTGACCCGGT
Allygus modestus genome assembly, chromosome: 1.
OY776111.1:44795423-44795438
AAACTTTATCAGTTCTGCCTAGCTTGTACT44795423GTAGCGGCTTATCCCTTGCTTCATACGATGTTTCACACTCAGGCCC
Dioctria linearis genome assembly, chromosome: 2.
OZ005741.1:322814979-322814994
GTGCAGGCTATCATCGGGACAGAACGAATT322814979GTAGCGGCTTATCCCTTAATTGGATCGGCATTGTGGGAGCCACCGC
Sepia lycidas genome assembly, chromosome: 29.
OZ010599.1:35597617-35597632
CTTGACATCTCCTCGGTATTTTGAAAAAGA35597617GTAGCGGCTTATCCCTTGTTTCTTGTTCAGGATAATACTTCCGCTT
Scyliorhinus canicula genome assembly, chromosome: 1.
LR744030.1:124293284-124293299
GCCACCCATTTTGAAGCCTACCTGACACCA124293284AGGGATAAGCCGCTACCAGACAGTAATTTTTTTTCTCTAATTTTCA
CAYY1000.rev CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens cDNA clone CAYY1000 3', mRNA sequence.
FC325824.1:103-118
CTTCAGCTTCAACTAAAAGTATATAATTCA103AGGGATAAGCCGCTACCGAACTATGGAATTTACTCTATTGGCGCTT
Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence.
AC097280.8:13041-13056
ATGTTGTTGGAGTCGGAGCGACGTGCTGCC13041AGGGATAAGCCGCTACCGCCTAGCTTCCTTGGGCTTCTCCACCCAC
Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
AP014959.1:23522846-23522861
ATGTTGTTGGAGTCGGAGCGACGTGCTGCC23522846AGGGATAAGCCGCTACCGCCTAGCTTCCTTGGGCTTCTCCACCCAC
Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 3.
AP027387.1:25273882-25273897
ATGTTGTTGGAGTCGGAGCGACGCGCTGCT25273882AGGGATAAGCCGCTACCGCCTAGCTTCCTTGGGCTTCTCCACCCAC
Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
CP012611.1:25569474-25569489
ATGTTGTTGGAGTCGGAGCGACGCGCTGCT25569474AGGGATAAGCCGCTACCGCCTAGCTTCCTTGGGCTTCTCCACCCAC
Thlaspi arvense genome assembly, chromosome: 4.
OU466860.2:7501446-7501461
AAAGAAGGAAGAGTCCAAGTATCTATTAAT7501446AGGGATAAGCCGCTACAATTTGAAAGAAGAGCAAAATTCAAAAATG
Sambucus nigra genome assembly, chromosome: 9.
OX422215.1:646289232-646289247
ACAGGGATGCCAAACCTGATGATTAATTCC646289232AGGGATAAGCCGCTACATCTTTTGTGAAGGCATGACGGACTCAATC
Oryza sativa genome assembly, chromosome: 3.
OX637248.1:26270038-26270053
ATGTTGTTGGAGTCGGAGCGACGTGCTGCC26270038AGGGATAAGCCGCTACCGCCTAGCTTCCTTGGGCTTCTCCACCCAC
Oryza sativa genome assembly, chromosome: 3.
OX637248.1:37193004-37193019
ATGTTGTTGGAGTCGGAGCGACGTGCTGCC37193004AGGGATAAGCCGCTACCGCCTAGCTTCCTTGGGCTTCTCCACCCAC
Magnetococcus marinus MC-1, complete genome.
CP000471.1:4109965-4109980
AACCACACTGGAACCGTGCCACCCTACCCA4109965AGGGATAAGCCGCTACGGTTTGCTCGGCTCGCTCTCTTCTAATGGG
Serratia fonticola strain R28 chromosome, complete genome.
CP072742.1:629655-629670
CTATGCTTCAGTGACTCAAATGTTGCGGCC629655AGGGATAAGCCGCTACGAAGTGGCTGCAGGTAAAGTGAATAGTGAT
Pieris brassicae genome assembly, chromosome: 6.
LR989937.1:3793290-3793305
TGCCGATCCTTCACTTGGGCCCCATATCAA3793290AGGGATAAGCCGCTACGGACAAGGATCCAGGATTCAATTTCACCGA
Hemaris fuciformis genome assembly, chromosome: 16.
OU015447.1:3079343-3079358
TATACATAATTCATACTTTTACATGAGTTC3079343AGGGATAAGCCGCTACCTATCCCTTTTGAGGATATAGACATAAATA
Sesia apiformis genome assembly, chromosome: Z.
OU611947.1:20810046-20810061
GTTCCCGTCGGTGGCGGAAAAAGGCGACTG20810046AGGGATAAGCCGCTACCACAAGCGCAGAGGAATTATACCACCTCTA
Clusia tigrina genome assembly, chromosome: X.
OV050032.1:151052219-151052234
ACTATAGGCCCTTTCATCATCACGTCGTTC151052219AGGGATAAGCCGCTACTAGTTTTACAGCTGCAATCGAAGTGTTGCG
Oscheius onirici genome assembly, chromosome: X.
OW051473.1:9260888-9260903
AGATAAGAAACAAGAGGTATGTTGGAGAGA9260888AGGGATAAGCCGCTACGAAATATAATTCAGTTTGAATGTAAGAATA
Ophonus ardosiacus genome assembly, chromosome: X.
OW964833.1:38974356-38974371
GTGCCTGCGTCGCGACGCGGACGTCGTTGC38974356AGGGATAAGCCGCTACTGCGTGGGATCGGATCGGATTTGCTTGGCA
Sesia bembeciformis genome assembly, chromosome: 5.
OX031029.1:5345700-5345715
AGTATATATGAGTATCCTAAAAGACGACTA5345700AGGGATAAGCCGCTACTGCAAGCCTTTAGGAGCTATACCATACCAT
Sesia bembeciformis genome assembly, chromosome: 6.
OX031030.1:1985589-1985604
TCTTCCCGCAGGTGCCATAAAAGGCGACCA1985589AGGGATAAGCCGCTACCGCAAGCGCTGAGGAACTGCACTACCTCTA
Acholoe squamosa genome assembly, chromosome: 17.
OX439051.1:61689606-61689621
ATGATGCATTAATGCATCAGCGGCCATTAC61689606AGGGATAAGCCGCTACCCACTGGCTTAGCGCCCATCTAAATGTGGC
Idaea biselata genome assembly, chromosome: Z.
OY292394.1:46681645-46681660
GACGACCGACCGCAAAAGAAAATTTATTGC46681645AGGGATAAGCCGCTACTGAGCTCTACAATAATTTACAAATCACAAA
Harpalus rubripes genome assembly, chromosome: X.
OY720458.1:49495594-49495609
GTGCCTGCGCCGCGACGCGGACGTCGCTGC49495594AGGGATAAGCCGCTACTGCGTGGGATCGGATCGGATTTGCTTGGCA
Tipula helvola genome assembly, chromosome: 2.
OY744482.1:373173465-373173480
AATTCCTTGATTTATATACGTGTCAAGGAT373173465AGGGATAAGCCGCTACTAATTAAATCAGTTGTTGATCTGAGAGCGA
Scoparia ambigualis genome assembly, chromosome: 7.
OY992508.1:15816742-15816757
AGTGTGGCTTTTGTTTTGTCGCAACAAGTC15816742AGGGATAAGCCGCTACTGTCTGTGTAGCAACTAAAATACTGTTTCG
Scoparia ambigualis genome assembly, chromosome: 14.
OY992515.1:26340074-26340089
TAGTCCGTTAGTCACCTTTTACGACACCCA26340074AGGGATAAGCCGCTACGCGACACGACTATTACAATGTACAATTATT
Sepia lycidas genome assembly, chromosome: 15.
OZ010585.1:106434018-106434033
TAGAAGTGTAGTAGACTTCAGAAGGAAACA106434018AGGGATAAGCCGCTACTCTTTTCCAAAAGACGCTTCGTTGGGTGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTAGCGGCTTATCCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTAGCGGCTTATCCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.410 | 0.401 | search_plus_done; http://172.18.8.135:50400/match?q=GTAGCGGCTTATCCCT&k=0&no_gap=0&offset=0&limit=50
0.654 | 0.244 | search_minus_done; http://172.18.8.135:50400/match?q=AGGGATAAGCCGCTAC&k=0&no_gap=0&offset=0&limit=4
0.671 | 0.017 | cgi_end;

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