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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:03:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:176208384-176208403
CGTTTTAATATGTTGAGTTTGAGGCCATAG176208384GTATAAATGGGAAGAGGAAACTTTGAGACTTTGAGGAACTATAGGGACTG
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:181547351-181547370
GTTTTTAATATGTTGAGTTTGAGGCCATAG181547351GTATAAATGGGAAGAGGAAACTTTGAGACTTTGAGGAAATATAGGGACTG
Arcobacteraceae bacterium isolate 75fe3c80-3cc0-4080-9318-41160763da2f genome assembly, chromosome: 1.
OY782822.1:1283326-1283345
AACCTACGAAGAGCTTCAGGAGCTTTTGGA1283326GTATAAATGGGAAGAGGAAACCATAAAAAAGCTTCTTGATAAAGGGATTA
Pherbina coryleti genome assembly, chromosome: 2.
OX030949.1:48479742-48479761
CAATGTCAACCTAGAATTGTACATTGTATA48479742GTATAAATGGGAAGAGGAAATGCCTGACTTCCGGCGCTTTTTAAACAAGA
Felis catus Senzu DNA, chromosome: E3, American Shorthair breed.
AP023167.1:11062453-11062472
GCTTTTTAGATCATAGTTACTTGATTTTCA11062453TTTCCTCTTCCCATTTATACAAAGTTAGAAAAAGAACAAGTGATCCAGCT
Pipistrellus nathusii genome assembly, chromosome: 3.
OY882860.1:13136295-13136314
CAGTCCCTATATTTCCTCAAAGTCTCAAAG13136295TTTCCTCTTCCCATTTATACCTATGGCCTCAACTCAACATATAAAAACAA
Pipistrellus nathusii genome assembly, chromosome: 3.
OY883180.1:13114913-13114932
CAGTCCCTATATTTCCTCAAAGTCTCAAAG13114913TTTCCTCTTCCCATTTATACCTATGGCCTCAACTCAACATATAAAAACAA
Erpetoichthys calabaricus genome assembly, chromosome: 7.
LR536438.2:54055173-54055192
CTGGCACATTTCTTTTAAGTCACTTACACC54055173TTTCCTCTTCCCATTTATACAGTGTAGCCATGTTCTATATTGTTATCAGC
Sparus aurata genome assembly, chromosome: 1.
LR537121.1:24424703-24424722
GCTCACAGGTCAACAAATTCTCCTCCTCCC24424703TTTCCTCTTCCCATTTATACTTCAGCTCCTCTGCTCCCCTTCTCCTGCCT
Scyliorhinus canicula genome assembly, chromosome: 6.
LR744035.1:192815589-192815608
GGTCCCTAATGGGCCCTACTTTTTCCCTAG192815589TTTCCTCTTCCCATTTATACACTCATAGAATATCTTGGGATTTTCCCTAT
Arcobacteraceae bacterium isolate 71d67385-9353-412f-8d24-32561d467f9a genome assembly, chromosome: 1.
OY781963.1:1447303-1447322
TTATCCCTTTATCAAGAAGCTTTTTTATGG1447303TTTCCTCTTCCCATTTATACTCTAAAAGCTCCTGAAGCTCTTCGTAAGTT
Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:84074142-84074161
CTAAATTGACCATTTCTTTCATATGACGCC84074142TTTCCTCTTCCCATTTATACCATAATGAATCAATTTTAGCCCTGGTCCTC
Limnephilus rhombicus genome assembly, chromosome: 23.
OV815293.1:37864700-37864719
CCAGCTCCGAATAGCCAAGCCCTCCCCCAG37864700TTTCCTCTTCCCATTTATACCTCTTTCCCGCCTCATTCAGCTTCACAACA
Rhogogaster chlorosoma genome assembly, chromosome: 10.
OX101806.1:4245092-4245111
ATAAGGGCAGAGTTTTGATCGACCGAAGCT4245092TTTCCTCTTCCCATTTATACTTGTCATCGTCAGAATAACAGTCATCTATC
Xylota segnis genome assembly, chromosome: 4.
OY757239.1:28852252-28852271
ACACACATTTTTTGGTTCAAAAATTTTCTG28852252TTTCCTCTTCCCATTTATACGTAACCCTTTTTAATTGACACTGTTCATCG
Megamerina dolium genome assembly, chromosome: 4.
OY978528.1:71377894-71377913
GAATTGAACATAAAGAAATCAATGTTCATT71377894TTTCCTCTTCCCATTTATACATAATACACAGTGGGACCTGTTATTGCGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTATAAATGGGAAGAGGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTATAAATGGGAAGAGGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.157 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=GTATAAATGGGAAGAGGAAA&k=0&no_gap=0&offset=0&limit=50
0.293 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCTCTTCCCATTTATAC&k=0&no_gap=0&offset=0&limit=46
0.301 | 0.008 | cgi_end;

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