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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 18:21:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS3CD88JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence.
EX908717.1:632-651
ACGTTGACCTCCACGGCCACCACTTTCGCG632GTATCCACGGAATCCACCAGTCCTTTCTCCATCCTTTGGATCATGAAGTC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_1588.
FX744485.1:891-910
ACGTTGACCTCCACGACCACCACTTTCGCG891GTATCCACGGAATCCACCAGTCCTTTCTCCATCCTTTGGATCATGAAGTC
TSA: Raphanus sativus RS21015 mRNA sequence.
JT805562.1:879-898
ACGTTGACCTCCACGGCCACCACTTTCGCG879GTATCCACGGAATCCACCAGTCTTTTCTCCATCCTTTGGATCATGAAGTC
Melolontha melolontha genome assembly, chromosome: 3.
OW285237.1:131741648-131741667
ACTTTCTCGATAATTACGGTTCGACGTGCA131741648GTATCCACGGAATCCACCAGGTCAGCATAGCGTTCTGCGTTGGTATCGTC
Cheilosia impressa genome assembly, chromosome: X.
OX411885.1:5425747-5425766
CATGATGAGCATGTAATTCCTTTTCTCTTT5425747GTATCCACGGAATCCACCAGTTGGACAGTGTTCGTCATATGTAACTGATT
RR4C293TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EX771423.1:488-507
GACTTAATGATCCAAAGGATGGAGAAAGGA488CTGGTGGATTCCGTGGATACCGCGAAAGTGGTGGTGGTCGTGGAGGTCAA
RS3CD88TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EX904907.1:498-517
GACTTCATGATCCAAAGGATGGAGAAAGGA498CTGGTGGATTCCGTGGATACCGCGAAAGTGGTGGCCGTGGAGGTCAACGT
Raphanus sativus mRNA, clone: RSCS01C10, 5' end sequence.
FY446254.1:445-464
GACTTCATGATCCAAAGGATGGAGAAAGGA445CTGGTGGATTCCGTGGATACCGCGAAAGTGGTGGTCGTGGAGGTCAACGT
TSA: Raphanus sativus var. sativus RNA, contig: WG3_173.
FX660539.1:537-556
GACTTCATGATCCAAAGGATGGAGAAAGGA537CTGGTGGATTCCGTGGATACCGCGAAAGTGGTGGTGGCCGTGGAGGTCAA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:17823490-17823509
GACTTCATGATCCAAAGGATGGAGAAAGGA17823490CTGGTGGATTCCGTGGATACCGCGAAAGTGGTGGCCGTGGAGGTCAACGT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:17823490-17823509
GACTTCATGATCCAAAGGATGGAGAAAGGA17823490CTGGTGGATTCCGTGGATACCGCGAAAGTGGTGGCCGTGGAGGTCAACGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTATCCACGGAATCCACCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTATCCACGGAATCCACCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.265 | 0.256 | search_plus_done; http://172.18.8.135:50400/match?q=GTATCCACGGAATCCACCAG&k=0&no_gap=0&offset=0&limit=50
0.571 | 0.306 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGTGGATTCCGTGGATAC&k=0&no_gap=0&offset=0&limit=45
0.575 | 0.004 | cgi_end;

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