GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 06:46:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:48758631-48758650
TTTTATATATATATAATATATATTGGGAGA48758631GTATCTAGTGAGAGGGAGGGTTCTTATGTGAGAGTGAGAGAATTAATTTT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:81418742-81418761
AAACACAAAACATAATAAATATATGAGGGA81418742GTATCTAGTGAGAGGGAGGGTTTTTATGTGAGAGTGAGAGGAATAATTTA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:16040698-16040717
ATATAGAGAGAGAGAGAGAGAGAGAGAGAG16040698GTATCTAGTGAGAGGGAGGGTTTTTATATGAGAGTGAGAGGAGAAATTTT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:16183568-16183587
TATATATATATATATATATATATAGAGGGG16183568GTATCTAGTGAGAGGGAGGGTTTTTATATGAGAGTGAGAGGAGCAATTTT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT11O06, TM0194.
AP006108.1:63849-63868
AAAATTTCTCCTCTCACTCTCATATAAAAA63849CCCTCCCTCTCACTAGATACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTATCTAGTGAGAGGGAGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTATCTAGTGAGAGGGAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=GTATCTAGTGAGAGGGAGGG&k=0&no_gap=0&offset=0&limit=50
0.107 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTCCCTCTCACTAGATAC&k=0&no_gap=0&offset=0&limit=46
0.107 | 0.001 | cgi_end;

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