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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:36:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Takifugu rubripes genome assembly, chromosome: 21.
LR584233.2:10367814-10367831
GAAGGAAGTGAAGGTGTTTCAGTGAATGAT10367814GTCACAACACCACCACGCTACTGATTCTATAGCCTGCCCTTTCAGAAC
Tetrao urogallus genome assembly, chromosome: 7.
OX596301.1:31062180-31062197
TATCTACAAGCTGCCAGGTCCTGCACTTTG31062180GTCACAACACCACCACGCGATGCTGCAGTCTTGGGGCAGAGCGGCTGG
Protomyctophum bolini genome assembly, chromosome: 11.
OZ001276.1:40742442-40742459
GAGGAACTGCGTCCCAAGTCAAAGCCAGCT40742442GTCACAACACCACCACGCCCATATATGGTTGTAGCAGGAAATAAATGT
Protomyctophum bolini genome assembly, chromosome: 11.
OZ001276.1:40755215-40755232
GAGGAACTGCGTCCCAAGTCAAAGCCAGCT40755215GTCACAACACCACCACGCCCATATATGGTTGTAGCAGGAAATAAATGT
Fusarium avenaceum strain WV21P1A chromosome 3.
CP109671.1:1551256-1551273
TACTTCTGATTTTATCCTGAGCATAGCCCT1551256GTCACAACACCACCACGCCCCAGACTGCCAGGTACACAGCTTGTATCG
Aegilops sharonensis genome assembly, chromosome: 2S.
LR880967.1:936247167-936247184
CCCAAAGACGTGTGCCGCCTCTTCGGACAT936247167GTCACAACACCACCACGCATGTATGAGGGCCCGGTACGACGCTCCGGT
Triticum turgidum subsp. durum genome assembly, chromosome: 2B.
LT934114.1:761574270-761574287
ACCGGAGACGTTTGCCGCCTCTTTGGACAT761574270GTCACAACACCACCACGCATGTATGAGGGCGCGGTACGACGCTCCGGT
Hordeum vulgare genome assembly, chromosome: 5H.
OX460107.1:589282797-589282814
TTGTCACCATCAAGCATGGGGTACTGGATG589282797GTCACAACACCACCACGCGCCTTCGAAGTCGACATGATCCTCTTCTTC
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:201353171-201353188
GTGCGGCCACCACGACCACGGCCTCGCCCA201353171GTCACAACACCACCACGCTTGGGCGCCATATGAAAGAAGAAGCAGAAG
Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:123330334-123330351
CGTCACGCTCGTCACAATATCACCATGCTT123330334GTCACAACACCACCACGCTTGTCACAACATGGCCACGACCGTCATGGT
Lathyrus sativus genome assembly, chromosome: 7.
OZ012741.1:506919919-506919936
ACCGTCACGGTCGTCACCACCACCACGCCC506919919GTCACAACACCACCACGCCCGTCATGCTCCAAATATTATAATAACGTT
Erwinia amylovora strain TS3128 chromosome, complete genome.
CP056034.1:3772173-3772190
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3772173GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain 11-7 chromosome.
CP063688.1:92531-92548
ATCATCTGGATGAGCAGCTTTCTGAAGCCG92531GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain 32-10 chromosome.
CP063691.1:86771-86788
ATCATCTGGATGAGCAGCTTTCTGAAGCCG86771GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain 33-1 chromosome.
CP063805.1:2864371-2864388
ATCATCTGGATGAGCAGCTTTCTGAAGCCG2864371GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain Ea1/79Sm chromosome, complete genome.
CP064855.1:3775928-3775945
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3775928GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain 19-7 chromosome, complete genome.
CP066780.1:3771684-3771701
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3771684GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain 17-2187 chromosome, complete genome.
CP066794.1:3772205-3772222
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3772205GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain ATCC 15580 chromosome, complete genome.
CP066796.1:3775536-3775553
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3775536GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora isolate CP201324 chromosome, complete genome.
CP076589.1:90864-90881
ATCATCTGGATGAGCAGCTTTCTGAAGCCG90864GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora isolate CP200930 chromosome, complete genome.
CP076590.1:3546749-3546766
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3546749GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora isolate CP20140001 chromosome, complete genome.
CP076592.1:1824051-1824068
ATCATCTGGATGAGCAGCTTTCTGAAGCCG1824051GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora isolate CP20161301 chromosome, complete genome.
CP076596.1:1811414-1811431
ATCATCTGGATGAGCAGCTTTCTGAAGCCG1811414GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Erwinia amylovora strain 99east-3-1 chromosome, complete genome.
CP117554.1:3767763-3767780
ATCATCTGGATGAGCAGCTTTCTGAAGCCG3767763GTCACAACACCACCACGCTCCACGGGCCGGAGCTGGCAGAACTGAAGC
Parapoynx stratiotata genome assembly, chromosome: 5.
OU342462.1:1873554-1873571
CGGCCTATAAATGCCCCACGCAGATATTGA1873554GTCACAACACCACCACGCTGGTACAATGCATTTTTTTTCATTTATTTA
Parapoynx stratiotata genome assembly, chromosome: 9.
OU342466.1:10105166-10105183
TTCTCATGTAGAAACATACGAGGAGTGTGG10105166GTCACAACACCACCACGCGGGCCCAATGCGGGTTCGCCAACATAACAA
Parapoynx stratiotata genome assembly, chromosome: 14.
OU342471.1:3969817-3969834
CCACATAAAAGAAGTAAATAAGGGGTATGA3969817GTCACAACACCACCACGCTGCCTGGCCCAAAGAGGTTGGTAACCAATT
Parapoynx stratiotata genome assembly, chromosome: 14.
OU342471.1:14189677-14189694
TACATATTTTTGAACGCTGACAACTGTTTT14189677GTCACAACACCACCACGCTGGTCCTATGCGAATTGGTTAGTTGCAGAA
Parapoynx stratiotata genome assembly, chromosome: 27.
OU342484.1:2716006-2716023
CTTTTTCATGGAGAAACTTGAGGAGTATGG2716006GTCACAACACCACCACGCTGGCTAAATATGGTTTGGTGGGTTCCAATA
Diarsia rubi genome assembly, chromosome: 19.
OW026430.1:10722044-10722061
CGCAACACTGCCCCTGAGTAAGATATCGCT10722044GTCACAACACCACCACGCGCCGCTCATTCACTGCTTTTTGTACTTTTC
Gibbula magus genome assembly, chromosome: 11.
OW388299.1:32059382-32059399
AACCCTGATCTTGTCCATGATTTGAGGAAT32059382GTCACAACACCACCACGCTGGTTCTTCTCTGCCACACGTTGAGGCGTG
Gibbula magus genome assembly, chromosome: 11.
OW388299.1:32070528-32070545
AACCCTGATCTTGTCCATGATTTGAGGAAT32070528GTCACAACACCACCACGCTGGTTCTTCTCTGCCACACGTTGAGGCGTG
Gibbula magus genome assembly, chromosome: 11.
OW388299.1:32101054-32101071
AACCCTGATCTTGTCCATGATTTGAGGAAT32101054GTCACAACACCACCACGCTGGTTCTTCTCTGCCACACGTTGAGGCGTG
Gibbula magus genome assembly, chromosome: 11.
OW388299.1:32133347-32133364
AACCCTGATCTTGTCCATGATTTGAGGAAT32133347GTCACAACACCACCACGCTGGTTCTTCTCTGCTACACGTTGAGGCGTG
Acentria ephemerella genome assembly, chromosome: 12.
OW971886.1:4299089-4299106
CCTATATGAAAAAAAACATGAGGAGTTTGG4299089GTCACAACACCACCACGCTGACCCAATACGGGATGGTTGGTGAAAGCG
Nymphula nitidulata genome assembly, chromosome: 2.
OX374618.1:11962335-11962352
CTGCATGGGAGAAACACATGAGGAGTTTGG11962335GTCACAACACCACCACGCTGACCCAATGAGGGTTGGTGAGTTAAAGCG
Nymphula nitidulata genome assembly, chromosome: 2.
OX374618.1:14399601-14399618
CTACATGGGAGATACTAATGAGGAGTTTGG14399601GTCACAACACCACCACGCTGGACTAATGTGGGTTGGTGGGTTAAAGCG
Nymphula nitidulata genome assembly, chromosome: 12.
OX374629.1:4377586-4377603
ATCATCATTGGGCACAGGCCTTTATTTATG4377586GTCACAACACCACCACGCTGGCCTAATTTGGATTGTTCGGTTAAAGCC
Nymphula nitidulata genome assembly, chromosome: 20.
OX374637.1:4147420-4147437
CTACATGGGAGAAACACATGAGGAGCTTGG4147420GTCACAACACCACCACGCTGCACGCTGGCCCAATGCGGGGTAGTGGGT
Diarsia brunnea genome assembly, chromosome: 21.
OX459017.1:10276896-10276913
CGCAACACTGCCCCTGAGTAAGATATGGCT10276896GTCACAACACCACCACGCGCCGCTCATTCACTGCTTTTTGTACTTTTC
Pasiphila rectangulata genome assembly, chromosome: 26.
OY720261.1:5008658-5008675
TCTATGCTATCACGGCAGACATGAAAGGTG5008658GTCACAACACCACCACGCGATCCCTGTGCAGGGAATCCAAAATAAGGC
Dasypolia templi genome assembly, chromosome: 12.
OY743148.1:13212136-13212153
CCTTGCTAACGCGCCTCTTCCGCCATAGAT13212136GTCACAACACCACCACGCCCAGACGCACCCTCCATGTCCAATTTATTA
Dioctria rufipes genome assembly, chromosome: 1.
OZ002740.1:369653871-369653888
ATTGAGGTGCTCTACTCCCAAAAACAGATT369653871GTCACAACACCACCACGCGTACTTAGGGAAGGTCAGTTCCGACGGCCC
Dioctria rufipes genome assembly, chromosome: 3.
OZ002742.1:105973613-105973630
GAACCTGAACGTTGTGTTATATTACTTCTA105973613GTCACAACACCACCACGCTCCGCAAGGTTGCCGCTATTCTGATTTCCA
Pleuronectes platessa genome assembly, chromosome: 14.
OX374661.1:11760232-11760249
CACATTTACAGTCACTCAAGAGAGAGGATG11760232GCGTGGTGGTGTTGTGACAATCCTCCTTGATCCATGAATTTGACCCCT
Porphyra yezoensis cDNA clone:PM062e10_r, 5' end.
AV435801.1:500-517
AGAGGCTGCTGTCGCTGCGGCAACCACCCC500GCGTGGTGGTGTTGTGACGGGGC
Jasminum sambac cultivar Hutoumoli linkage group Lg10.
CP073641.1:34267783-34267800
GTTTTTGTGACTCTAGTAGTAGTTGTGGTG34267783GCGTGGTGGTGTTGTGACTGCGTTTGTAACTCAACGGAGTTGTAATTG
Tetradesmus obliquus strain DOE0152z chromosome 8b.
CP126215.1:2552807-2552824
CCTCGCTATACACGTGCCGTCAATGGTGAT2552807GCGTGGTGGTGTTGTGACTGCAGCACTACCAGCACTGGGGCCAGCCAG
Fragaria x ananassa cultivar Benihoppe chromosome 3.
CP139773.1:10560923-10560940
AGGTGTGAATGAACCGGAAGCAACAAGAGA10560923GCGTGGTGGTGTTGTGACAGAATCACCAGTCAGAGAAGAGGGTTTGAG
Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:869051101-869051118
GTTGTGACGAGCATGGTGGTGTTGTGACGA869051101GCGTGGTGGTGTTGTGACGAGCGTGAAGCCTGTGACGATCGTGGTGGG
Erwinia amylovora strain E-2 chromosome, complete genome.
CP024970.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain FB-20 chromosome, complete genome.
CP050240.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain FB-307 chromosome, complete genome.
CP050242.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain TS3238 chromosome, complete genome.
CP050244.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain FB-86 chromosome, complete genome.
CP050258.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain FB-207 chromosome, complete genome.
CP050263.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain Ea1189 chromosome, complete genome.
CP055227.2:3796845-3796862
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA3796845GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora isolate CP201142 chromosome, complete genome.
CP076591.1:2503757-2503774
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA2503757GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora isolate CP20130204 chromosome, complete genome.
CP076593.1:1750457-1750474
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA1750457GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora isolate CP20086202 chromosome, complete genome.
CP076594.1:3621599-3621616
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA3621599GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora isolate CP20130202 chromosome, complete genome.
CP076595.1:2124202-2124219
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA2124202GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain CP200242 isolate missinsg chromosome, complete genome.
CP077850.1:205255-205272
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA205255GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora strain Ea102 chromosome, complete genome.
CP104022.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora CFBP1430 complete genome.
FN434113.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora ATCC 49946 chromosomal sequence.
FN666575.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Erwinia amylovora ATCC BAA-2158, whole genome shotgun sequence, contig 1.
FR719181.1:367-384
GCTTCAGTTCTGCCAGCTCCGGCCCGTGGA367GCGTGGTGGTGTTGTGACCGGCTTCAGAAAGCTGCTCATCCAGATGAT
Glaucopsyche alexis genome assembly, chromosome: 6.
FR990048.1:8066725-8066742
TGCGGCCGTGGAGGGATCGCAGGGGGAGAG8066725GCGTGGTGGTGTTGTGACACTCTCCCTACCTCCCTGCGAGCTGGCGGG
Glaucopsyche alexis genome assembly, chromosome: 7.
FR990049.1:2048294-2048311
TGCGGCCGTGGAGGGATTGCAGAGGGAGAG2048294GCGTGGTGGTGTTGTGACACTCTCCCTACCCCCCTGCGAGCTGGTGGG
Atethmia centrago genome assembly, chromosome: 14.
HG995380.1:15613228-15613245
GAAAAGTACAAAAAGCAATGAATGAACGGC15613228GCGTGGTGGTGTTGTGACAGGCATATCTCACTCAGGGGCAGTGTTGCG
Agonopterix subpropinquella genome assembly, chromosome: 13.
OV277706.1:3200034-3200051
ATAATGTGGCTGGTGCACTCTTACATTCCA3200034GCGTGGTGGTGTTGTGACAACACCACAATTGAGTTTCATATTTGCAGA
Tholera decimalis genome assembly, chromosome: 17.
OW964565.2:19251325-19251342
GTGTAGCACAAAAAGCGATGTGTGAGCAGC19251325GCGTGGTGGTGTTGTGACAAGCATATCTCTCCAGGGGCAGTGTTGCGA
Anopheles nili genome assembly, chromosome: 2.
OX031310.1:62614738-62614755
GCCCAATGGCAAACGTCCCGTCCAGCTAGA62614738GCGTGGTGGTGTTGTGACAGGTCCAAAAATCCTCCACCCCCCTGGGGT
Nymphula nitidulata genome assembly, chromosome: 2.
OX374618.1:7642164-7642181
CGCTTTAGCCCTCTAACCCGCATTGGCCCA7642164GCGTGGTGGTGTTGTGACCCAAATTCTTCGTGTGTTCCTACCTTGTAG
Nymphula nitidulata genome assembly, chromosome: 4.
OX374621.1:4780355-4780372
CGCTTTAACCCACCAACCCGCATTGGGCCA4780355GCGTGGTGGTGTTGTGACCCAAACTCCTCATGTGTTTCTTCCATGTAG
Nymphula nitidulata genome assembly, chromosome: 6.
OX374623.1:14425699-14425716
GTCATTTCTTTCAGTCGATGCATTGGGCTA14425699GCGTGGTGGTGTTGTGACCCTAACTCCTCATGTGTTTCTCTCATGTAG
Nymphula nitidulata genome assembly, chromosome: 9.
OX374626.1:7446608-7446625
CGCTTTAACTCACAAACCCGCATTGGGCCA7446608GCGTGGTGGTGTTGTGACCCAATCTCTTCATGTGTTTGTCCCATGTAG
Lithophane leautieri genome assembly, chromosome: 19.
OX424477.1:7132331-7132348
GAAAAGTACAAAAAGGAATGAATGAACAGC7132331GCGTGGTGGTGTTGTGACAGCCATATCTCACTCAGGGGCAGTGTTGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCACAACACCACCACGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCACAACACCACCACGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.261 | 0.252 | search_plus_done; http://172.18.8.135:50400/match?q=GTCACAACACCACCACGC&k=0&no_gap=0&offset=0&limit=50
0.422 | 0.162 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTGGTGGTGTTGTGAC&k=0&no_gap=0&offset=0&limit=6
0.444 | 0.022 | cgi_end;

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