GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 06:09:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sus scrofa genome assembly, chromosome: 6.
OY997213.1:84192015-84192034
AGCTCCGCAGCCACTTCAGTCTGCCTCGGA84192015GTCACTCACTCTCGCTCTTGGAACAGCTGGGAGAATTCCACATCACCTCT
Citrus reticulata microsatellite DNA, clone Ci01C07.
AJ567394.1:84-103
TTTGGAGAATCTTAATGAATTAATTATAAC84GTCACTCACTCTCGCTCTTGAGTCTCTCTCTCTCTCTCTCTCTATAAATT
Aegilops umbellulata cultivar TA1851 chromosome 6U.
CP136059.1:523777540-523777559
CTTGGTCGTTGGATAGGTACTAACGATACT523777540GTCACTCACTCTCGCTCTTGGTCGATAGGATAGAGATGTCAGCTAGTATT
Triticum aestivum genome assembly, chromosome: 1A.
LR862508.1:575998034-575998053
CTTGGTCGTTCGATAGGTACTAACGATGCT575998034GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR862550.1:582517914-582517933
CTTGGTCGTTCGATAGGTACTAACGATGCT582517914GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR865458.1:570499430-570499449
CTTGGTCGTTCGATAGGTACTAACGATGCT570499430GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR865479.1:579592510-579592529
CTTGGTCGTTCGATAGGTACTAACGATGCT579592510GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR865500.1:571881966-571881985
CTTGGTCGTTCGATAGGTACTAACGATGCT571881966GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR865739.1:576715513-576715532
CTTGGTCGTTCGATAGGTACTAACGATGCT576715513GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR865760.1:580185446-580185465
CTTGGTCGTTCGATAGGTACTAACGATGCT580185446GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
LR878435.1:573831602-573831621
CTTGGTCGTTCGATAGGTACTAACGATGCT573831602GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Aegilops sharonensis genome assembly, chromosome: 1S.
LR880966.1:766858125-766858144
CTTGGTCGTTGGGTAGGTACTAACGGTGCT766858125GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGCTGCTAGT
Triticum aestivum genome assembly, chromosome: 1A.
LS992080.1:573695519-573695538
CTTGGTCGTTCGATAGGTACTAACGATGCT573695519GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum turgidum subsp. durum genome assembly, chromosome: 1A.
LT934111.1:565980262-565980281
CTTGGTCGTTCGATAGGTACTAACGATGCT565980262GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
OU015721.1:585819536-585819555
CTTGGTCGTTCGATAGGTACTAACGATGCT585819536GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1D.
OU015723.1:497853953-497853972
CTTGGTCGTTGGATAGGTACTAACGATACT497853953GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTAGTATT
Triticum aestivum genome assembly, chromosome: 1A.
OU343169.1:588328817-588328836
CTTGGTCGTTCGATAGGTACTAACGATGCT588328817GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
OU963872.1:583565182-583565201
CTTGGTCGTTCGATAGGTACTAACGATGCT583565182GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
OV100737.1:573499054-573499073
CTTGGTCGTTCGATAGGTACTAACGATGCT573499054GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
OW530310.1:573499054-573499073
CTTGGTCGTTCGATAGGTACTAACGATGCT573499054GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum aestivum genome assembly, chromosome: 1A.
OX637225.1:465021771-465021790
CTTGGTCGTTCGATAGGTACTAACGATGCT465021771GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum monococcum genome assembly, chromosome: 1A.
OY737850.1:621142115-621142134
TGGTCGTTGGATAGGTATACTAACGATGCT621142115GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:619212339-619212358
CTTGGTCGTTGGATAGGTACTAACGATGCT619212339GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGCTAGTATT
Triticum timopheevii genome assembly, chromosome: 1At.
OY997261.1:591820391-591820410
CTTGGTCGTTCGATAGGTACTAACGATGCT591820391GTCACTCACTCTCGCTCTTGGTCGATAGGATAGGGATGTCAGGTATTTGA
CL06-C4-501-072-H01-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
EY877915.1:276-295
AATTTATAGAGAGAGAGAGAGAGAGAGACT276CAAGAGCGAGAGTGAGTGACGTTATAATTAATTCATTAAGATTCTCCAAA
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-4G23.
CU633957.2:127776-127795
AGAGGTGATGTGGAATTCTCCCAGCTGTTC127776CAAGAGCGAGAGTGAGTGACTCCGAGGCAGACTGAAGTGGCTGCGGAGCT
Aegilops umbellulata cultivar TA1851 chromosome 6U.
CP136059.1:523785940-523785959
CCTGACAATCCCTATCCTCTATCCAACGAC523785940CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR862510.1:474661215-474661234
AATACTACCTGACATCCCTATCCTATCGAC474661215CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1A.
LR862529.1:575437685-575437704
TCAAATACCTGACATCCCTATCCTATCGAC575437685CAAGAGCGAGAGTGAGTGACAGCATCGTTAGTACCTATCGAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR862531.1:473622805-473622824
AATACTACCTGACATCCCTATCCTATCGAC473622805CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR862552.1:472167557-472167576
AATACTACCTGACATCCCTATCCTATCGAC472167557CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR865460.1:472978296-472978315
AATACTACCTGACATCCCTATCCTATCGAC472978296CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR865481.1:474957966-474957985
AATACTACCTGACATCCCTATCCTATCGAC474957966CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR865502.1:473694511-473694530
AATACTACCTGACATCCCTATCCTATCGAC473694511CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR865741.1:477282808-477282827
AATACTACCTGACATCCCTATCCTATCGAC477282808CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR865762.1:468122516-468122535
AATACTACCTGACATCCCTATCCTATCGAC468122516CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1A.
LR877309.1:577342252-577342271
TCAAATACCTGACATCCCTATCCTATCGAC577342252CAAGAGCGAGAGTGAGTGACAGCATCGTTAGTACCTATCGAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR877311.1:480747675-480747694
AATACTACCTGACATCCCTATCCTATCGAC480747675CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LR878437.1:474810676-474810695
AATACTACCTGACATCCCTATCCTATCGAC474810676CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
LS992082.1:477427848-477427867
AATACTACCTGACATCCCTATCCTATCGAC477427848CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
OU343183.1:485847825-485847844
AATACTACCTGACATCCCTATCCTATCGAC485847825CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
OU963874.1:477169859-477169878
AATACTACCTGACATCCCTATCCTATCGAC477169859CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
OV100739.1:475775338-475775357
AATACTACCTGACATCCCTATCCTATCGAC475775338CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
OW530312.1:475775338-475775357
AATACTACCTGACATCCCTATCCTATCGAC475775338CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum aestivum genome assembly, chromosome: 1D.
OX637227.1:354400303-354400322
AATACTACCTGACATCCCTATCCTATCGAC354400303CAAGAGCGAGAGTGAGTGACAGTATCGTTAGTACCTATCCAACGACCAAG
Triticum monococcum genome assembly, chromosome: 1A.
OY737850.1:621146511-621146530
AATACTAGCTGACATCCCTATCCTATCGAC621146511CAAGAGCGAGAGTGAGTGACAGCATCGTTAGTACCTATCCAACAACCAAG
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:619216827-619216846
AATACTAGCTGACATCCCTATCCTATCGAC619216827CAAGAGCGAGAGTGAGTGACAGCATCGTTAGTACCTATCCAACAACCAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCACTCACTCTCGCTCTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCACTCACTCTCGCTCTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.386 | 0.377 | search_plus_done; http://172.18.8.135:50400/match?q=GTCACTCACTCTCGCTCTTG&k=0&no_gap=0&offset=0&limit=50
0.567 | 0.181 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGAGCGAGAGTGAGTGAC&k=0&no_gap=0&offset=0&limit=26
0.582 | 0.015 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).