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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:57:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:28932015-28932034
GCCAAGCTTTTCGCCCGCCATGGCGCCGCC28932015GTCACTGTCGTCACCACACCCGGCAACGAGCCCCTCGTTCGCCCAGCCAT
Streptomonospora litoralis strain M2 chromosome, complete genome.
CP036455.1:4899938-4899957
GCAGCGCCGGTGGAGGTCGCAGGACCCGTC4899938GTCACTGTCGTCACCACACCCGCTCAATTGTTGGCCTCGCCCTGCAGAGT
Nycteola revayana genome assembly, chromosome: 5.
OX344843.2:4506134-4506153
CTACAGAGGTGGCACTCCACGGGATTAATA4506134GTCACTGTCGTCACCACACCTAACTGTAACCTAGATCTCACTCAATCAAA
Delphinus delphis genome assembly, chromosome: 10.
OX465336.1:79049476-79049495
CTGACCGGCCTGCTCCCCCTGGTGTGCAGA79049476GGTGTGGTGACGACAGTGACAGCGTCAGGACTACTGACCCACCGCACCTG
Stenella coeruleoalba genome assembly, chromosome: 10.
OX596395.1:104726748-104726767
CTGACCGGCCTGCTCCCCCTGGTGTGCAGA104726748GGTGTGGTGACGACAGTGACAGTGTCAGGACTACTGACCCACCGCACCTG
TSA: Musa acuminata AAA Group Unigene78942_NK1 mRNA sequence.
JV392332.1:10-29
TCGTTGCCG10GGTGTGGTGACGACAGTGACGGCGGCGCCATGGCGGGCGAAAAGCTTGGC
Latimeria chalumnae DNA, Fosmid clone: CFIC-067I13, sequence: CFIC-067I13.b.
GA654461.1:14-33
AGTCACAATAGGC14GGTGTGGTGACGACAGTGACTCAATGGCCTATTAAACAGGCGGTGTAGTG
Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:27687155-27687174
ATGGCTGGGCGAACGAGGGGCTCGTTGCCG27687155GGTGTGGTGACGACAGTGACGGCGGCGCCATGGCGGGCGAAAAGCTTGGC
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:27541049-27541068
ATGGCTGGGCGAACGAGGGGCTCGTTGCCG27541049GGTGTGGTGACGACAGTGACGGCGGCGCCATGGCGGGCGAAAAGCTTGGC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:24754790-24754809
ATGGCTGGGCGAACGAGGGGCTCGTTGCCG24754790GGTGTGGTGACGACAGTGACGGCGGCGCCATGGCGGGCGAAAAGCTTGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCACTGTCGTCACCACACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCACTGTCGTCACCACACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.150 | 0.141 | search_plus_done; http://172.18.8.135:50400/match?q=GTCACTGTCGTCACCACACC&k=0&no_gap=0&offset=0&limit=50
0.307 | 0.157 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGTGGTGACGACAGTGAC&k=0&no_gap=0&offset=0&limit=47
0.312 | 0.005 | cgi_end;

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