GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 16:19:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT18P14, TM0186.
AP009954.1:78781-78801
AACAACAACAACAAGGGTCAGGGTCATTAT78781GTCAGTGTTGGTTCATATCAAAAACTGGATCAGGATTACGATTTCCGAGAC
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:50999924-50999944
TTCAACAACAACAAGGGTCAGGGTCATTAT50999924GTCAGTGTTGGTTCATATCAAAAACTGGATCAGGATTACGATTTCCGAGAC
Xylocampa areola genome assembly, chromosome: 12.
OW285211.1:12905863-12905883
TTTCCCGAAAAGTTACTCGGTTGCCAAACA12905863GTCAGTGTTGGTTCATATCAAGTCGAGATCTAAACCAACCATCCATAAAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTCAGTGTTGGTTCATATCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCAGTGTTGGTTCATATCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.089 | 0.080 | search_plus_done; http://172.18.8.135:50400/match?q=GTCAGTGTTGGTTCATATCAA&k=0&no_gap=0&offset=0&limit=50
0.103 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=TTGATATGAACCAACACTGAC&k=0&no_gap=0&offset=0&limit=47
0.103 | 0.000 | cgi_end;

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