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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:40:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 7.
LR862386.1:114803474-114803493
TTCTGTCTGTCCTATGTAGGTTCCCCAGAT114803474GTCAGTTTTGAGTCAGTGAGTCCCACTATCTCAAGTCAGCTGTTTCTGTG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392548.1:4433972-4433991
ATTTAATGATCAATATTTATTCTTATTTTT4433972GTCAGTTTTGAGTCAGTGAGTGTATTTTACATTACATGCAATTAATTAAC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392557.1:4491320-4491339
ATTATTTGATCAATATTTATTCTTGTTTTT4491320GTCAGTTTTGAGTCAGTGAGTGTATTTTACATTACATGCAATTAATTATT
Seladonia tumulorum genome assembly, chromosome: 12.
OU565277.1:7379956-7379975
GTTACTACTAAATAGATGAGTCAGTAATAA7379956GTCAGTTTTGAGTCAGTGAGTCTCAATGATGAGTCAGTTTTTTATTTTAT
Arvicola amphibius genome assembly, chromosome: 8.
LR862388.1:38440720-38440739
AGAGAGATCACTGACCTGAACCAGCAGGAG38440720CTCACTGACTCAAAACTGACTGCTGGGGAAACTCCACCAAACTAGACCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCAGTTTTGAGTCAGTGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCAGTTTTGAGTCAGTGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.175 | 0.167 | search_plus_done; http://172.18.8.135:50400/match?q=GTCAGTTTTGAGTCAGTGAG&k=0&no_gap=0&offset=0&limit=50
0.265 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=CTCACTGACTCAAAACTGAC&k=0&no_gap=0&offset=0&limit=46
0.266 | 0.001 | cgi_end;

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