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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 09:01:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq1.
LA607784.1:4071-4090
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4071GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq4.
LA607787.1:3948-3967
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3948GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq10.
LA607793.1:3863-3882
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3863GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq12.
LA607795.1:3863-3882
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3863GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq20.
LA607803.1:4170-4189
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4170GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq23.
LA607806.1:3948-3967
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3948GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq24.
LA607807.1:4085-4104
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4085GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq25.
LA607808.1:4085-4104
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4085GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq30.
LA607812.1:3986-4005
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3986GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq31.
LA607813.1:3986-4005
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3986GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq34.
LA607816.1:4170-4189
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4170GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq36.
LA607818.1:4085-4104
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4085GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq41.
LA607823.1:4208-4227
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4208GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq48.
LA607830.1:3863-3882
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3863GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq49.
LA607831.1:3948-3967
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3948GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq54.
LA607835.1:4085-4104
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4085GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq58.
LA607839.1:4071-4090
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4071GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq59.
LA607840.1:4170-4189
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4170GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq61.
LA607842.1:4293-4312
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4293GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq63.
LA607844.1:3863-3882
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3863GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq71.
LA607852.1:4208-4227
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4208GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq76.
LA607857.1:3986-4005
ACCGAGTTTGGACTCGAGGAAGGTCATGAG3986GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq93.
LA607874.1:4293-4312
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4293GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq96.
LA607877.1:4208-4227
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4208GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq99.
LA607880.1:4170-4189
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4170GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq100.
LA607881.1:4293-4312
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4293GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp294146_c0_seq101.
LA607882.1:4071-4090
ACCGAGTTTGGACTCGAGGAAGGTCATGAG4071GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
Humulus lupulus genome assembly, chromosome: 4.
OY720651.1:41892059-41892078
ACCGAGTTTGGACTCGAGGAAGGTCATGAG41892059GTCCTGAGCTATGGCAGTTTGAGGAATGTTTGAGACTCGGACAGTGGTTC
Myotis daubentonii genome assembly, chromosome: 2.
OY725360.1:26453863-26453882
TTCTTCTCCACAGATGAAGATTCAGGCTAC26453863AAACTGCCATAGCTCAGGACCTTTTATATGGGAATTAAGTTAAAACTGTT
TSA: Cannabis sativa PK03010.1_1.CasaPuKu mRNA sequence.
JP449166.1:184-203
GAACCACCGTCCGAGTCTCAAACATTCCTC184AAACTGCCATAGCTCAGGACCTCTTGGCCTTCCTCGAGTCCAAACTCGGT
Humulus lupulus RNA-dependent RNA polymerase 2 (RDR2) mRNA, complete cds.
MW658776.1:118-137
GAACCACTGTCCGAGTCTCAAACATTCCTC118AAACTGCCATAGCTCAGGACCTCATGACCTTCCTCGAGTCCAAACTCGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCCTGAGCTATGGCAGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCCTGAGCTATGGCAGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.656 | 0.648 | search_plus_done; http://172.18.8.135:50400/match?q=GTCCTGAGCTATGGCAGTTT&k=0&no_gap=0&offset=0&limit=50
0.807 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=AAACTGCCATAGCTCAGGAC&k=0&no_gap=0&offset=0&limit=22
0.810 | 0.002 | cgi_end;

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