GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:8246590-8246609

CCCAATCGTTGATGCCACACATGAGAAGAG8246590GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGTTGAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:17562554-17562573

CCCAAACGTTGATGCCACACATGAGAAGAG17562554GTCCTTATTGCAGAATGAGCATGAACCTTCGATGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:23728089-23728108

CCCAAACGTTGATGCCACACTTGAGAAGAG23728089GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:25826323-25826342

CCCAAATGTTGATGCCAAACATGAGAGGAG25826323GTCCTTATTGCAGAATGAGCATGAACCTTCATTGAAGTATAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:11300231-11300250

CCCAAACGTTGATGCCACACTTGAGAAGAG11300231GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:31146430-31146449

CCCAAACGTTGATGCCACACATGAGAAGAG31146430GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:33619604-33619623

CCCAAACGTTGATGCCAAATATGAGAAGAG33619604GTCCTTATTGCAGAATGAGCATGAACCTTCGTTGCAGCAGAAGAAGAAGC

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:33854853-33854872

CCCAAACGTTGATGCCACACATGAGAAGAG33854853GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGACGAAGC

Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:16444424-16444443

CCCAATCGTTGATGCCACACATGAGAAGAG16444424GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGTTGAAGAAGAAGC

Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:29947418-29947437

CCCAAACGTTGATGCCACACTTGAGAAGAG29947418GTCCTTATTGCAGAATGAGCATGAACTTGCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:24868307-24868326

CCCAAATGTTGATGCCAAACATGAGAGGAT24868307GTCCTTATTGCAGAATGAGCATGAACCTTCATTGAAGTAGAAGAAGAAGC

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:9964059-9964078

TCCAAACGTTGATGCCAAACATGAGAGGAG9964059GTCCTTATTGCAGAATGAGCATGAATCTTCGTTGCAGTAGAAGAAGCATA

Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:12534564-12534583

CCCAAACGTTGATGCCACACATGAGAATAG12534564GTCCTTATTGCAGAATGAGCATGAACCTTCGATGCAGTTGAAGAAGAAGC

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:40710257-40710276

CCCAAACGTTGATGCCACACATGAGAAGAG40710257GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:11756075-11756094

CCCAAACGTTGATGCCATACATGAGAAGAG11756075GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:21029839-21029858

CCCAAACGTTGATGCCACACATGAGAAGAG21029839GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:29775394-29775413

CCCAATCGTTGATGCCACACATGAGAAGAG29775394GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGTTGAAGAAGAAGC

Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:23499578-23499597

CCCAAACGTTGATGCCAAACATGAGAGGAG23499578GTCCTTATTGCAGAATGAGCATGAATCTTTGTTACAGTAGAAGAAGCAGA

Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:37956955-37956974

CCCAAACGTTGATGCCACACATGAGAAGAG37956955GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGTAGTTGAAGAAGAAGC

Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:4720445-4720464

CCCAAACGTTGATGCCACACATGAGAAGAG4720445GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:32809859-32809878

CCCAAACGTTGATGCCAAACATGAGAAGAG32809859GTCCTTATTGCAGAATGAGCATGAACCTTCGTTGCAGCTGAAAAAGAAGC

Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:29229144-29229163

CCCAATCGTTGATGCCACACATGAGAAGAG29229144GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGTTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 2.
OU696678.1:12506249-12506268

CCCAAACGTTGATGCCACACATGAGAATAG12506249GTCCTTATTGCAGAATGAGCATGAACCTTCGATGCAGTTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 9.
OU696685.1:18461791-18461810

CCCAAACGTTGATGCCACACATGAGAAGAG18461791GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 3.
OU744544.1:4987707-4987726

CCCAAACGTTGATGCCACACATGAGAAGAG4987707GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 9.
OU744550.1:18622215-18622234

CCCAAACGTTGATGCCACACATGAGAAGAG18622215GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 10.
OU744551.1:33010426-33010445

CCCAAACGTTGATGCCAAACATGAGAAGAG33010426GTCCTTATTGCAGAATGAGCATGAACCTTCGTTGCAGCTGAAAAAGAAGC

Malus domestica genome assembly, chromosome: 11.
OU744552.1:9905591-9905610

TCCAAACGTTGATGCCAAACATGAGAGGAG9905591GTCCTTATTGCAGAATGAGCATGAATCTTCGTTGCAGTAGAAGAAGCATA

Malus domestica genome assembly, chromosome: 15.
OU744556.1:29644253-29644272

CCCAATCGTTGATGCCACACATGAGAAGAG29644253GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGTTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 3.
OU744955.1:29968325-29968344

CCCAAACGTTGATGCCACACATGAGAAGAG29968325GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 4.
OU744956.1:1854247-1854266

CCCAAATGTTGATGCCACACATGAGAAGAG1854247GTCCTTATTGCAGAATGAGCATGAACCTTTGATGCAGTTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 5.
OU744957.1:40348374-40348393

CCCAAACGTTGATGCCACACATGAGAAGAG40348374GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 10.
OU744962.1:33754388-33754407

CCCAAACGTTGATGCCAAACATGAGAAGAG33754388GTCCTTATTGCAGAATGAGCATGAACCTTCGTTGCAGCTGAAAAAGAAGC

Malus domestica genome assembly, chromosome: 17.
OU744969.1:7137862-7137881

CCCAAACGTTGATGCCACACATGAGAAGAG7137862GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 2.
OU744992.1:12514898-12514917

CCCAAACGTTGATGCCACACATGAGAATAG12514898GTCCTTATTGCAGAATGAGCATGAACCTTCGATGCAGTTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 7.
OU744997.1:11784227-11784246

CCCAAACGTTGATGCCATACATGAGAAGAG11784227GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 8.
OU744998.1:5728174-5728193

CCCAAACGTTGATGCCATACATGAGAAGAG5728174GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 9.
OU744999.1:18086097-18086116

CCCAAACGTTGATGCCACACATGAGAAGAG18086097GTCCTTATTGCAGAATGAGCATGAACCTTCGGTGCAGGTGAAGAAGAAGC

Malus domestica genome assembly, chromosome: 10.
OU745000.1:32834492-32834511

CCCAAACGTTGATGCCAAACATGAGAAGAG32834492GTCCTTATTGCAGAATGAGCATGAACCTTCGTTGCAGCTGAAAAAGAAGC

Malus domestica genome assembly, chromosome: 11.
OU745001.1:9779844-9779863

TCCAAACGTTGATGCCAAACATGAGAGGAG9779844GTCCTTATTGCAGAATGAGCATGAATCTTCGTTGCAGTAGAAGAAGCATA

Malus x robusta genome assembly, chromosome: 10.
OY720334.1:29294461-29294480

CCCAAACGTTGATGCCAAACATGAAAGGAG29294461GTCCTTATTGCAGAATGAGCATGAATCTTTGTTGTAGTAGAAGAAGCAGA

Pyrus communis genome assembly, chromosome: 1.
OY757068.1:27574556-27574575

CTCAAACGTTGATGCCAAACATAAGATGAG27574556GTCCTTATTGCAGAATGAGCATGAATCTTCGTTGCCGTAGAAAAAGAAGC

Pyrus communis genome assembly, chromosome: 8.
OY757075.1:21042657-21042676

CCCAAACGTTGATGCCAAACATGAGAGAAA21042657GTCCTTATTGCAGAATGAGCATGAACATTCGTTGCAGTAGAAGAAGAAGA

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:36787423-36787442

GCTTCTTCTTCACCTGCACCAAAGGTTCAT36787423GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:8017956-8017975

GCTTCTTCTTCACCTGCACCGAAGGTTCAT8017956GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:4308955-4308974

GCTTCTTCTTCACCTGCACCGAAGGTTCAT4308955GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:4258406-4258425

GCTTCTTCTTCACCTGCACCGAAGGTTCAT4258406GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:25403849-25403868

GCTTCTTCTTCACCTGCACCGAAGGTTCAT25403849GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:7659114-7659133

GCTTCTTCTTCACCTGCACCGAAGGTTCAT7659114GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:4382460-4382479

GCTTCTTCTTCACCTGCACCGAAGGTTCAT4382460GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:4457521-4457540

GCTTCTTCTTCACCTGCACCGAAGGTTCAT4457521GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:28172732-28172751

GCTTCTTCTTCAACTGCATCGAAGGTTCAT28172732GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus domestica genome assembly, chromosome: 7.
OU696683.1:3375621-3375640

GCTTCTTCTTCACCTGCACCGAAGGTTCAT3375621GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus domestica genome assembly, chromosome: 11.
OU696687.1:4500218-4500237

GCTTCTTCTTCACCTGCACCGAAGGTTCAT4500218GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus domestica genome assembly, chromosome: 14.
OU696690.1:8845187-8845206

GCTTCTTCTTCAACTGCACCGAAGGTTCAT8845187GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACAATTGGG

Malus domestica genome assembly, chromosome: 7.
OU744548.1:10156341-10156360

GCTTCTTCTTCACCTGCACCGAAGGTTCAT10156341GCTCATTCTGCAATAAGGACCTCTTCTCATGTGTGGCATCAACGTTTGGG

Malus domestica genome assembly, chromosome: 7.
OU744959.1:5001218-5001237

TCTGCTTCTTCTACTGCAACAAAGATTCAT5001218GCTCATTCTGCAATAAGGACATCCTCTCATGTTTGGCATCAACGTTTGGG

Malus x robusta genome assembly, chromosome: 7.
OY720331.1:24326836-24326855

GCTTCTTCTTCAACTGCATCGAAGGTTCAT24326836GCTCATTCTGCAATAAGGACCTATTCTCATGTGTGGCATCAACGTTTGGG

Malus x robusta genome assembly, chromosome: 12.
OY720336.1:2043598-2043617

GCTTCTTCTTCACCTGCACCGCAAGTTCAT2043598GCTCATTCTGCAATAAGGACCTCTTCTCAAGTGTGGCATCAACGTTTGGG

Pyrus communis genome assembly, chromosome: 14.
OY757081.1:24367065-24367084

GCTTCTTCTTCTACTGCAACGAAGGTCCAT24367065GCTCATTCTGCAATAAGGACATCCTTTCATGTTTGGCATCAACGTTTGGG

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Debug Info:

0.009 | 0.009 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=GTCCTTATTGCAGAATGAGC&k=0&no_gap=0&offset=0&limit=50
0.191 | 0.065 | search_minus_done; http://172.18.8.135:50400/match?q=GCTCATTCTGCAATAAGGAC&k=0&no_gap=0&offset=0&limit=7
0.203 | 0.011 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: