GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:43:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KR 1020130015711-A/1: A transcription factor gene, CaHSTF1 related to plant defense response and transgenic plants using the same gene.
DI249426.1:963-982
ATACTTATGGTTTTCGTAAAGTTACAACGA963GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA
KS23001B12 KS23 Capsicum annuum cDNA, mRNA sequence.
GD111046.1:434-453
ATACTTATGGTTTTCGTAAAGTTACAACGA434GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA
KS23009F12 KS23 Capsicum annuum cDNA, mRNA sequence.
GD111836.1:602-621
ATACTTATGGTTTTCGTAAAGTTACAACGA602GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA
KS23039B02 KS23 Capsicum annuum cDNA, mRNA sequence.
GD114619.1:602-621
ATACTTATGGTTTTCGTAAAGTTACAACGA602GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA
KS23060A02 KS23 Capsicum annuum cDNA, mRNA sequence.
GD116575.1:564-583
ATACTTATGGTTTTCGTAAAGTTACAACGA564GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGG
TSA: Capsicum annuum MGMT_Contig41271 mRNA sequence.
JW091515.1:1023-1042
ATACTTATGGTTTTCGTAAAGTTACAACGA1023GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:3706338-3706357
GTTATTAGGGTTTTCGTAAAGTTACAACGA3706338GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 12.
CP124708.1:1325951-1325970
GATATTAGGGGTTTCGTAAAATTACAACGA1325951GTCGATGGGAGTTCAGCAATGACAATTTCAAAAAGGGCAAAAGGGATTTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:4297856-4297875
GTTATTAGGGTTTTCGTAAAGTTACAACGA4297856GTCGATGGGAGTTCAGCAATGACAAGTTCAAAAAAGGCAAAAGGGATATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCGATGGGAGTTCAGCAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCGATGGGAGTTCAGCAAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.621 | 0.613 | search_plus_done; http://172.18.8.135:50400/match?q=GTCGATGGGAGTTCAGCAAT&k=0&no_gap=0&offset=0&limit=50
0.727 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGCTGAACTCCCATCGAC&k=0&no_gap=0&offset=0&limit=41
0.727 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).