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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:32:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chroococcidiopsis thermalis PCC 7203, complete genome.
CP003597.1:3374450-3374469
CTTGCTGAGGAATTATCTAAAGCTTTCTCT3374450GTCGATTCTTCCTCATAAATCCATTGCAAACCTAAGTGAATCCTTAATTT
Chroococcidiopsis sp. CCNUC1 chromosome, complete genome.
CP097480.1:3383701-3383720
CTTGCTGAGGAATTATCTAAAGCTTTCTCT3383701GTCGATTCTTCCTCATAAATCCATTGCAAACCTAAGTGAATCCTTAATTT
Rhaphigaster nebulosa genome assembly, chromosome: X.
OX411307.1:48847895-48847914
TTGGCCCCTGATTATGAAAAATATAACGAG48847895GTCGATTCTTCCTCATAAATCTGAGATTTATAAAAAAAATCTTGAAATGG
Pinus pinaster shoot EST, clone AS03A02 similar to COTTON FIBER.
AL749945.1:453-472
GTCCATCAGAAGCGGCAGCAGGAGGAGCCA453ATTTATGAGGAAGAATCGACGGAAAGATCCGGTATAACGGAATCGGGCAG
GQ027112.B3_B07 GQ099: Mixed spruce tissues Picea glauca cDNA clone GenomeQuebec_Id:GQ027112_B07 5', mRNA sequence.
DV973245.1:291-310
CAGAAGCAGCAGCAGCAGGAGGAGGAGCCA291ATTTATGAGGAAGAATCGACGGAAAGATCCGGCATAACGGAATTGGAAGA
GQ03122.B7_I03 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03122_I03 5', mRNA sequence.
EX357361.1:4-23
CCA4ATTTATGAGGAAGAATCGACGGAAAGATCCGGCATAACGGAATTGGAAGA
GQ03514.B7_H09 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03514_H09 5', mRNA sequence.
EX405893.1:470-489
CAGAAGCAGCAGCAGCAGGAGGAGGAGCCA470ATTTATGAGGAAGAATCGACGGAAAGATCCGGCATAACGGAATTGGAAGA
GQ0171.B3.r_H08 GQ017: Immature somatic EMBRYOS Picea glauca cDNA clone GQ0171_H08 5', mRNA sequence.
GE478007.1:291-310
CAGAAGCAGCAGCAGCAGGAGGAGGAGCCA291ATTTATGAGGAAGAATCGACGGAAAGATCCGGCATAACGGAATTGGAAGA
Picea glauca clone GQ03514_H09 mRNA sequence.
BT114433.1:470-489
CAGAAGCAGCAGCAGCAGGAGGAGGAGCCA470ATTTATGAGGAAGAATCGACGGAAAGATCCGGCATAACGGAATTGGAAGA
Polydrusus tereticollis genome assembly, chromosome: X.
OY755264.1:43268741-43268760
CTCTTCTATCACCTGAAAATTTCAAGTTCC43268741ATTTATGAGGAAGAATCGACTTGATACCTGCTGTAGTATATGGGGAAGAG
Polydrusus tereticollis genome assembly, chromosome: X.
OY987335.1:45985625-45985644
CTCTTCTATCACCTGAAAATTTCAAGTTCC45985625ATTTATGAGGAAGAATCGACTTGATACCTGCTGTAGTATATGGGGAAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCGATTCTTCCTCATAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCGATTCTTCCTCATAAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.180 | 0.171 | search_plus_done; http://172.18.8.135:50400/match?q=GTCGATTCTTCCTCATAAAT&k=0&no_gap=0&offset=0&limit=50
0.527 | 0.347 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTATGAGGAAGAATCGAC&k=0&no_gap=0&offset=0&limit=47
0.532 | 0.005 | cgi_end;

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