GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:49:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MAG: Ralstonia sp. isolate bin465 chromosome.
CP070721.1:9694-9713
GCGCGGGCTGCCGCGCTTCACATAGCCCAG9694GTCGTCGACCGACTTGTAGCCGACCAGCCATGCGTTGTTCGATACCAGCC
Streptomyces rochei 7434AN4 DNA, complete genome.
AP018517.1:4664088-4664107
CCAGGACGCGGTCGGGGTCGTGTGCATGAT4664088GTCGTCGACCGACTTGTAGCCGATCCATCCGACGAACCCCAGGAACGCCA
Ralstonia insidiosa strain ATCC 49129 chromosome 1, complete sequence.
CP016022.1:1820980-1820999
GCGCGGGCTGCCGCGCTTCACATAGCCCAG1820980GTCGTCGACCGACTTGTAGCCGACCAGCCATTCGTTGTTCGACACCATCC
Burkholderia lata strain A05 chromosome 2, complete sequence.
CP024944.1:1550419-1550438
GCGCGGGCTGCCGCGCTTCACGTAGCCCAG1550419GTCGTCGACCGACTTGTAGCCGACGAGCCAGTCGTTGTTCGACACGAGCG
Streptomyces sp. SUK 48 chromosome, complete genome.
CP045740.1:4774196-4774215
CCAGGACGCGGTCGGGGTCGTGTGCACGAT4774196GTCGTCGACCGACTTGTAGCCGATCCACCCGACGAACCCCAGGAACGCCA
Streptomyces griseofuscus strain DSM 40191 chromosome, complete genome.
CP051006.1:4864008-4864027
CCAGGACGCGGTCGGGGTCGTGTGCATGAT4864008GTCGTCGACCGACTTGTAGCCGATCCATCCGACGAACCCCAGGAACGCCA
Streptomyces sp. Z423-1 chromosome.
CP053109.1:5349761-5349780
CCAGGACGCCCTCGGCGTCGTATGGACCAC5349761GTCGTCGACCGACTTGTAGCCGATCCAGCTGACGAAACCGACGAAGGCCA
Streptomyces sp. WP-1 chromosome.
CP123923.1:4591955-4591974
CCAGGACGCGGTCGGGGTCGTGTGCACGAT4591955GTCGTCGACCGACTTGTAGCCGATCCACCCGACGAACCCGAGGAACGCCA
MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome.
CP096137.1:752296-752315
TCAACGCGACGACGAAGACGCTGTTCAAGC752296GCTACAAGTCGGTCGACGACTACGCCCGCGCGGATCCGGCCGAACTGGAG
Streptomyces sp. endophyte_N2 chromosome, complete genome.
CP028719.1:3823702-3823721
TGGCGTTCCTGGGGTTCGTCGGATGGATCG3823702GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG
Streptomyces murinus strain CR-43 chromosome, complete genome.
CP046623.1:7782258-7782277
TGGCGTTCCTGGGGTTCGTCGGCTGGATCG7782258GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG
Streptomyces broussonetiae strain T44 chromosome.
CP047020.1:4379172-4379191
TGGCGTTCCTGGGCTTCGTGGGCTGGATCG4379172GCTACAAGTCGGTCGACGACATCATCCACACCACCCCGGCCGCGTCCTGG
Streptomyces sp. HF10 chromosome, complete genome.
CP047144.1:3462865-3462884
TGGCGTTCCTCGGGTTCGTCGGGTGGATCG3462865GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACCGCGTCCTGG
Streptomyces chromofuscus strain DSM 40273 chromosome, complete genome.
CP063374.1:3571117-3571136
TGGCCTTCGTCGGGTTCGTCGCCTGGATCG3571117GCTACAAGTCGGTCGACGACGTGGTCCACACGACTCCGCGGGCGTCCTGG
Streptomyces murinus strain Am1 chromosome, complete genome.
CP066774.1:8086320-8086339
TGGCGTTCCTGGGGTTCGTCGGATGGATCG8086320GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACCGCGTCCTGG
Streptomyces murinus strain NBC_00520 chromosome, complete genome.
CP107838.1:3820873-3820892
TGGCGTTCCTGGGGTTCGTCGGCTGGATCG3820873GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACCGCGTCCTGG
Streptomyces murinus strain NBC_01332 chromosome, complete genome.
CP108378.1:3786451-3786470
TGGCGTTCCTGGGGTTCGTCGGCTGGATCG3786451GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG
Streptomyces murinus strain STR-1 chromosome, complete genome.
CP139930.1:3823702-3823721
TGGCGTTCCTGGGGTTCGTCGGATGGATCG3823702GCTACAAGTCGGTCGACGACATCGTGCACACGACCCCGACGGCGTCCTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTCGTCGACCGACTTGTAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCGTCGACCGACTTGTAGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.326 | 0.317 | search_plus_done; http://172.18.8.135:50400/match?q=GTCGTCGACCGACTTGTAGC&k=0&no_gap=0&offset=0&limit=50
0.418 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=GCTACAAGTCGGTCGACGAC&k=0&no_gap=0&offset=0&limit=42
0.425 | 0.006 | cgi_end;

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