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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:39:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: AHGS49O22.
DH961681.1:56-75
ACGAATAAGCCACACCATTTTTTCCCACTT56GTCTGCAAACAACCCTCCTCAAATTAATATCACAACAAAAAAAAGCATTA
Arachis hypogaea DNA, clone: AHGS44O13.
DH962436.1:252-271
ACGAATAAGCCACACCATTTTTTCCCACTT252GTCTGCAAACAACCCTCCTCAAATTAATATCACAACGAAAAAAAGCATTA
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:4248687-4248706
ACGAATAAGCCACACCATTTTTTCCCCCTT4248687GTCTGCAAACAACCCTCCTCAAATTAATGTCACAAAAAAAAAGCATTAGA
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:5496356-5496375
ACGAATAAGCCACACCATTTTTTCCCACTT5496356GTCTGCAAACAACCCTCCTCAAATTAATATCACAACAAAAAAAAGCATTA
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:5655188-5655207
ACGAATAAGCCACACCATTTTTTCCCACTT5655188GTCTGCAAACAACCCTCCTCAAATTAATATCACAACAAAAAAAAGCATTA
Poecilobothrus nobilitatus genome assembly, chromosome: 1.
OX352772.1:193823528-193823547
GAAAATGATAAAGTGCGAGAAAAAGCTCTT193823528GAGGAGGGTTGTTTGCAGACATAGTTCACCAGCAGCTCCGAGCATGACAT
Sepia lycidas genome assembly, chromosome: 2.
OZ010572.1:51638188-51638207
AGGAGAAGGAAAACTCTGAATTCAAAACCT51638188GAGGAGGGTTGTTTGCAGACCTTGTGGCACGTAGTCCACCAGGTCTCTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCTGCAAACAACCCTCCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCTGCAAACAACCCTCCTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.136 | 0.127 | search_plus_done; http://172.18.8.135:50400/match?q=GTCTGCAAACAACCCTCCTC&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGAGGGTTGTTTGCAGAC&k=0&no_gap=0&offset=0&limit=45
0.164 | 0.002 | cgi_end;

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