GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Homo sapiens chromosome 18, clone CTD-2013O15, complete sequence.
AC100777.2:138520-138539

CAACTTTTGGATTTTTATATTAGCATGTTG138520GTCTGCCTCTTCAATTTGTCCACTTCTGTGTCTCACCCTGCAAAGCATCC

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB045I17, complete sequence.
AC189362.2:42474-42493

AAGACAGCCATCGAGGAGCCGCGTGTCTTG42474GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTACTA

Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:77380-77399

AAGACAGCCATCGAGGAGCCGCGTGTCTTG77380GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTAGTA

Brassica napus genome assembly, chromosome: A03.
HG994357.1:72226-72245

AAGACAGCCATCGAGGAGCCGCGTGTCTTG72226GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTAAAATATACTAGTA

Brassica rapa genome, scaffold: A03.
LR031572.1:93286-93305

AAGACAGCCATCGAGGAGCCGCGTGTCTTG93286GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTTAAATATACTCCAT

Brassica rapa genome assembly, chromosome: A03.
LS974619.2:93305-93324

AAGACAGCCATCGAGGAGCCGCGTGTCTTG93305GTCTGCCTCTTCAATTTGTCAGTAAGACGAACTAGTTAAATATACTCCAT

Homo sapiens DNA, chromosome 18, nearly complete genome.
AP023478.1:50443981-50444000

GGATGCTTTGCAGGGTGAGACACAGAAGTG50443981GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Homo sapiens isolate CHM13 chromosome 18.
CP068260.2:53186653-53186672

GGATGCTTTGCAGGGTGAGACACAGAAGTG53186653GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Homo sapiens isolate NA24385 chromosome 18.
CP139525.1:51786662-51786681

GGATGCTTTGCAGGGTGAGACACAGAAGTG51786662GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Homo sapiens isolate NA24385 chromosome 18.
CP139548.1:53426075-53426094

GGATGCTTTGCAGGGTGAGACACAGAAGTG53426075GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 714 from Patent WO2004074320.
CQ870293.1:231430-231449

GGATGCTTTGCAGGGTGAGACACAGAAGTG231430GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 78 from Patent WO2006013072.
CS401581.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 79 from Patent WO2006013072.
CS401582.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 5 from Patent WO2006089911.
CS409888.1:541-560

AGAGAGTATATTTAACTAGTTCGTCTTACT541GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCCTCGATGGCTGTCT

Sequence 6 from Patent WO2006089911.
CS409889.1:279-298

AGAGAGTATATTTAACTAGTTCGTCTTACT279GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

JP 2009520459-A/436: THERAPEUTIC TARGETS IN CANCER.
DM209897.1:231430-231449

GGATGCTTTGCAGGGTGAGACACAGAAGTG231430GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 1241 from patent US 8216786.
GZ368962.1:652534-652553

GGATGCTTTGCAGGGTGAGACACAGAAGTG652534GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 78 from Patent EP2163635.
HC471042.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 79 from Patent EP2163635.
HC471043.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 78 from Patent EP2166103.
HC476902.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 79 from Patent EP2166103.
HC476903.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 78 from Patent EP2166104.
HC477707.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 79 from Patent EP2166104.
HC477708.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 78 from patent US 8465915.
HJ230574.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 79 from patent US 8465915.
HJ230575.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 78 from patent US 9133466.
HL197148.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

Sequence 79 from patent US 9133466.
HL197149.1:601-620

AGAGAGTATATTTAACTAGTTCGTCTTACT601GACAAATTGAAGAGGCAGACCAAGACACGCGGCTCCTCGATGGCTGTCTT

KR 1020190033687-A/6: Mutant Genes as Diagnosis Marker for Endometriosis and and the uses thereof.
LY649067.1:643150-643169

GGATGCTTTGCAGGGTGAGACACAGAAGTG643150GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 888 from patent US 10233495.
MM797831.1:643150-643169

GGATGCTTTGCAGGGTGAGACACAGAAGTG643150GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 1241 from patent US 10584384.
MO941386.1:652534-652553

GGATGCTTTGCAGGGTGAGACACAGAAGTG652534GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 2007 from patent US 10724096.
MV449107.1:643151-643170

GGATGCTTTGCAGGGTGAGACACAGAAGTG643151GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 387 from patent US 11180807.
MY728208.1:643151-643170

GGATGCTTTGCAGGGTGAGACACAGAAGTG643151GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 1241 from patent US 11408034.
OO445332.1:652534-652553

GGATGCTTTGCAGGGTGAGACACAGAAGTG652534GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Sequence 2007 from patent US 11549145.
OS137907.1:643151-643170

GGATGCTTTGCAGGGTGAGACACAGAAGTG643151GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Eukaryotic synthetic construct chromosome 18.
CP034496.1:50499691-50499710

GGATGCTTTGCAGGGTGAGACACAGAAGTG50499691GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Eukaryotic synthetic construct chromosome 18.
CP034521.1:50499691-50499710

GGATGCTTTGCAGGGTGAGACACAGAAGTG50499691GACAAATTGAAGAGGCAGACCAACATGCTAATATAAAAATCCAAAAGTTG

Data Export:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.121 | 0.112 | search_plus_done; http://172.18.8.135:50400/match?q=GTCTGCCTCTTCAATTTGTC&k=0&no_gap=0&offset=0&limit=50
1.316 | 1.196 | search_minus_done; http://172.18.8.135:50400/match?q=GACAAATTGAAGAGGCAGAC&k=0&no_gap=0&offset=0&limit=43
1.336 | 0.020 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: