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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:20:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:24805437-24805455
TTGGAAGATTTCTTAGGTTTGGATTCCTTC24805437GTCTTCTTCTCTGCTTCGGCCTTTGGTTCTTCTTTCTCCGAGGCTGGTG
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:25895208-25895226
TTGGAAGCTTTCTTAGGTTTGGATTCCTTC25895208GTCTTCTTCTCTGCTTCGGGCTTAGGTTCTTCTTTCTCCGAGGCTGGTG
Arabis alpina genome assembly, chromosome: 2.
LT669789.1:35870018-35870036
CACGATTGTGTTGGTTGTGTTTGCTTCCTA35870018GTCTTCTTCTCTGCTTCGGTCTAGTGTTGTTTATCTGATTCAGACTCTC
Phragmites australis genome assembly, chromosome: 13.
OY282624.1:18830344-18830362
CTTCTCCCTGACCTGGAAGCCGAGCTCAGG18830344GTCTTCTTCTCTGCTTCGGCCGTAGATCAAGATTCAGGCGCCGCTGACA
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY737500.1:341101155-341101173
GCAGCAGTGGCGGCGGCGGCATCCTCTGCC341101155GTCTTCTTCTCTGCTTCGGCCTTCTCGCAGACGAGACGGTCAGCTTCGC
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737659.1:282147834-282147852
GCAGCGGTGGCGGTGGCAGCATCCTCTACC282147834GTCTTCTTCTCTGCTTCGGCCTTCTCGCGGACGAGACGGTCAGCTTCGG
Glutamicibacter mishrai strain S5-52 chromosome.
CP032549.1:373906-373924
TCGCCTTCCTTCGAATCCGCGGCAGAGTCA373906GTCTTCTTCTCTGCTTCGGTTGAGGTTTTGCCCACAGTGGTCTTCGGGG
Bifidobacterium pullorum subsp. gallinarum strain CACC 514 chromosome CACC514, complete sequence.
CP035464.1:379015-379033
GTGCCATTCGATTGTGTCGACTCGGCGGCA379015GTCTTCTTCTCTGCTTCGGTCATGGGATGTTCTCCTATGGTATGCAATC
Glutamicibacter mishrai strain CX1 chromosome, complete genome.
CP101461.1:2254940-2254958
TCGCCTTCCTTCGAATCCGCGGCAGAGTCA2254940GTCTTCTTCTCTGCTTCGGTTGAGGTTTTGCCCACAGTGGTCTTCGGGG
Membranipora membranacea genome assembly, chromosome: 10.
OU612074.1:15232083-15232101
CTTCCATCTATTGACTTGACCAGCATGAGA15232083GTCTTCTTCTCTGCTTCGGTTGGTAACCGAGACATGATCACTCTGACTG
Lacanobia oleracea genome assembly, chromosome: 2.
OX493387.1:8051931-8051949
AGACCGTATGAAGGAGTTCTTAGCTTTGGC8051931GTCTTCTTCTCTGCTTCGGCTCGGCCAGGAGACCGACAAGGAAGCAATA
Ophion ventricosus genome assembly, chromosome: 11.
OZ010721.1:12415081-12415099
AACATCAATTAATGAAGTATTTTGCCTCGG12415081GTCTTCTTCTCTGCTTCGGGCTGAAATATTGTGGTTGCTTTGGATTTTT
Trifolium repens mRNA, clone: WCC05e10_051, unspecified EST.
FY455804.1:112-130
CACCAGCCTCGGAGAAAGAAGAACCAAAGG112CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC07g18_091, unspecified EST.
FY456557.1:137-155
CACCAGCCTCGGAGAAAGAAGAACCTAAGG137CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC10n09_040, unspecified EST.
FY457770.1:136-154
CACCAGCCTCGGAGAAAGAAGAACCTAAGC136CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC10n13_008, unspecified EST.
FY457774.1:150-168
CACCAGCCTCGGAGAAAGAAGAACCTAAGC150CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC10o06_095, unspecified EST.
FY457790.1:140-158
CACCAGCCTCGGAGAAAGAAGAACCTAAGC140CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC11o20_031, unspecified EST.
FY458141.1:131-149
CACCAGCCTCGGAGAAAGAAGAACCTAAGG131CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC12c23_073, unspecified EST.
FY458233.1:119-137
CACCAGCCTCGGAGAAAGAAGAACCAAAGG119CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC13d06_090, unspecified EST.
FY458580.1:165-183
CACCAGCCTCGGAGAAAGAAGAACCTAAGC165CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC13i15_037, unspecified EST.
FY458691.1:140-158
CACCAGCCTCGGAGAAAGAAGAACCTAAGC140CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC15i11_069, unspecified EST.
FY459384.1:158-176
CACCAGCCTCGGAGAAAGAAGAACCAAAGG158CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAATCTTCCAA
Trifolium repens mRNA, clone: WCC17o14_031, unspecified EST.
FY460209.1:160-178
CACCAGCCTCGGAGAAAGAAGAACCAAAGG160CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAATCTTCCAA
Trifolium repens mRNA, clone: WCC20b03, unspecified EST.
FY460983.1:105-123
CACCAGCCTCGGAGAAAGAAGAACCTAAGC105CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC20f16, unspecified EST.
FY461082.1:135-153
CACCAGCCTCGGAGAAAGAAGAACCAAAGG135CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC22l15_046, unspecified EST.
FY461912.1:134-152
CACCAGCCTCGGAGAAAGAAGAACCAAAAG134CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAATCTTCCAA
Trifolium repens mRNA, clone: WCC23c15_041, unspecified EST.
FY462072.1:136-154
CACCAGCCTCGGAGAAAGAAGAACCTAAGC136CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC23l23_078, unspecified EST.
FY462279.1:166-184
CACCAGCCTCGGAGAAAGAAGAACCAAAGG166CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAATCTTCCAA
Trifolium repens mRNA, clone: WCC24n14_024, unspecified EST.
FY462678.1:132-150
CACCAGCCTCGGAGAAAGAAGAACCTAAGC132CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC28j12_086, unspecified EST.
FY464004.1:145-163
CACCAGCCTCGGAGAAAGAAGAACCTAAGC145CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC30e22, unspecified EST.
FY464609.1:119-137
CACCAGCCTCGGAGAAAGAAGAACCTAAGG119CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC33l18_094, unspecified EST.
FY465840.1:157-175
CACCAGCCTCGGAGAAAGAAGAACCTAAGC157CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC33p13_016, unspecified EST.
FY465927.1:150-168
CACCAGCCTCGGAGAAAGAAGAACCAAAAG150CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC34f18_084, unspecified EST.
FY466064.1:124-142
CACCAGCCTCGGAGAAAGAAGAACCTAAGG124CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC36p18, unspecified EST.
FY467003.1:103-121
CACCAGCCTCGGAGAAAGAAGAACCTAAGG103CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC39l10_062, unspecified EST.
FY467994.1:140-158
CACCAGCCTCGGAGAAAGAAGAACCTAAGC140CCGAAGCAGAGAAGAAGACGAAGGAATCGAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC42f13_004, unspecified EST.
FY468935.1:152-170
CACCAGCCTCGGAGAAAGAAGAACCTAAGC152CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Trifolium repens mRNA, clone: WCC43p13_016, unspecified EST.
FY469522.1:136-154
CACCAGCCTCGGAGAAAGAAGAACCTAAGC136CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Marchantia polymorpha subsp. ruderalis Tak-1 DNA, chromosome: 5.
AP019870.1:6404013-6404031
CGCTGTCACCACCTCAGGAAGATGTAAGAC6404013CCGAAGCAGAGAAGAAGACTTCGGAGGAGGAACCAAATGAGTTAGATGT
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:24791376-24791394
CACCAGCCTCGGAGAAAGAAGAACCAAAGG24791376CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAATCTTCCAA
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:25880895-25880913
CACCAGCCTCGGAGAAAGAAGAACCTAAGC25880895CCGAAGCAGAGAAGAAGACGAAGGAATCCAAACCTAAGAAAGCTTCCAA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX459976.1:18509643-18509661
CAAGCGAAGCTGACCGTCTCCGCGAGAATG18509643CCGAAGCAGAGAAGAAGACGGCAGAGGATACTGCCGCTGCCGCCGCTGC
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737434.1:64295148-64295166
CTCACTACCAAGGGAGAATTTTGCTCGGAA64295148CCGAAGCAGAGAAGAAGACCTCCCCTTGGTCCTCTACGGGGTTGGGCTT
Platycnemis pennipes genome assembly, chromosome: 5.
OW121851.1:28695144-28695162
AGCGTCTCGACAGCAACCCATCTGCGTACA28695144CCGAAGCAGAGAAGAAGACTTTGGGTAAGTCACGCATTGCTCGAGGTCA
Dorcus parallelipipedus genome assembly, chromosome: 5.
OY284480.1:17675635-17675653
GAGATGTTAAAAGGAATGTACGAAGAATGG17675635CCGAAGCAGAGAAGAAGACCCAGAAAAACATGATAAGATAGATAGAAAA
Stenurella melanura genome assembly, chromosome: 9.
OY757317.1:90234905-90234923
AAGACATGCTAAAGCGGGAAGTTAATCAAT90234905CCGAAGCAGAGAAGAAGACTCATTTGGAAATTGTGGATGAATATAAGCT
Pseudeuparius sepicola genome assembly, chromosome: 8.
OY987306.1:33798429-33798447
CCGTGGTTCGAACGCGTATAGCGCCCGTGG33798429CCGAAGCAGAGAAGAAGACAAATTCCAGACTTTTTCTTGCTCCTTGCAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTCTTCTTCTCTGCTTCGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTCTTCTTCTCTGCTTCGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.205 | 0.196 | search_plus_done; http://172.18.8.135:50400/match?q=GTCTTCTTCTCTGCTTCGG&k=0&no_gap=0&offset=0&limit=50
2.307 | 2.103 | search_minus_done; http://172.18.8.135:50400/match?q=CCGAAGCAGAGAAGAAGAC&k=0&no_gap=0&offset=0&limit=38
2.330 | 0.023 | cgi_end;

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