GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:22:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cajanus cajan cultivar UPAS 120 contig24798.UPAS mRNA sequence.
EZ642515.1:114-135
AAATAGCAATTAAACATAAATACACACATA114GTGACGAGGATATACAAATTCCAATCCACCATATATGTATAAGCAAATTAAA
Sequence 15236 from patent US 10766935.
MV658631.1:1032-1053
TTTAATTTGCTTATACATATATGGTGGATT1032GGAATTTGTATATCCTCGTCACTATGTGTGTATTTATGTTTAATTGCTATTT
Sequence 15236 from patent US 11566053.
OS282110.1:1032-1053
TTTAATTTGCTTATACATATATGGTGGATT1032GGAATTTGTATATCCTCGTCACTATGTGTGTATTTATGTTTAATTGCTATTT
Glycyrrhiza uralensis cDNA, clone: H335_D1L1_P01_P1_A01.f, 5'-end sequence.
FS238592.1:246-267
AGGCTCTTCACGCTTTATGCATGGTGGATT246GGAATTTGTATATCCTCGTCACTATGTTGTAATTTACTATTTTGCGGTAGCA
Glycyrrhiza uralensis cDNA, clone: H335_D1L1_P01_P1_G11.f, 5'-end sequence.
FS238669.1:259-280
AGGCTCTTCACGCTTTATGCATGGTGGATT259GGAATTTGTATATCCTCGTCACTATGTTGTAATTTACTATTTTGCGGTAGCA
TSA: Cajanus cajan cultivar Asha contig30484.Asha mRNA sequence.
EZ678348.1:249-270
TTTAATTTGCTTATACATATATGGTGGATT249GGAATTTGTATATCCTCGTCACTATGTGTGTATTTATGTTTAATTGCTATTT
Sphenostylis stenocarpa genome assembly, chromosome: 1.
OY731398.1:37630662-37630683
GATCTTTAATTTGCTCATACATGGTGGATT37630662GGAATTTGTATATCCTCGTCACTATGTGTGTATTTATTTATATATGTTTACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGACGAGGATATACAAATTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGACGAGGATATACAAATTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=GTGACGAGGATATACAAATTCC&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.260 | search_minus_done; http://172.18.8.135:50400/match?q=GGAATTTGTATATCCTCGTCAC&k=0&no_gap=0&offset=0&limit=49
0.363 | 0.004 | cgi_end;

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