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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 22:11:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bufo bufo genome assembly, chromosome: 9.
LR991675.1:215928346-215928365
CTACATTGGTAAGTCCTGCCATTGGTCTAT215928346GTGACGATGCTGTGCTCTGTGCCCTCCCCTGGTGCATGCATTTAAAGAGG
Chryseobacterium sp. SG20098 chromosome, complete genome.
CP134622.1:2517758-2517777
GCGTAGACCTTGTAAAAATGGCCAACCTGG2517758GTGACGATGCTGTGCTCTGTGAACTGACGAATGAAGACGGTTCTATGGCA
Taurulus bubalis genome assembly, chromosome: 20.
OU342730.1:10219016-10219035
AGACGGGCATCTCACACGCATGTAAGATAC10219016ACAGAGCACAGCATCGTCACATTCTGCACAGATATTATGTTATCTCTGTC
PU1_plate5_C09 PU1 Prunus persica cDNA similar to weakly similar to protein kinase CPK1 [Solanum tuberosum], mRNA sequence.
DY633837.1:288-307
AACCGCGCCCACGGCCAATCACAACCGGAA288ACAGAGCACAGCATCGTCACAATCAACAACCCCGCCGGTCAAGCAAGAAC
PU1_plate43_P09 PU1 Prunus persica cDNA similar to weakly similar to protein kinase CPK1 [Solanum tuberosum], mRNA sequence.
DY635259.1:329-348
AACCGCGCCCACGGCCAATCACAACCGGAA329ACAGAGCACAGCATCGTCACAATCAACAACCCCGCCGGTCAAGCAAGAAC
PU3_plate41_F19 PU3 Prunus persica cDNA similar to weakly similar to protein kinase CPK1 [Solanum tuberosum], mRNA sequence.
DY644543.1:377-396
AACCGCGCCCACGGCCAATCACAACCGGAA377ACAGAGCACAGCATCGTCACAATCAACAACCCCGCCGGTCAAGCAAGAAC
PU3_plate48_E07 PU3 Prunus persica cDNA similar to weakly similar to calcium/calmodulin-dependent protein kinase CaMK2 [Nicotiana tabacum], mRNA sequence.
DY645676.1:111-130
AACCGCGCCCACGGCCAATCACAACCGGAA111ACAGAGCACAGCATCGTCACAATCAACAACCCCGCCGGTCAAGCAAGAAC
Pm_2352 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW870926.1:397-416
AANCGCGCCCACGGCCAATCACAACCAGAA397ACAGAGCACAGCATCGTCACCATCAACAACCACACCGGTCAAGCAAGAAC
Prunus dulcis DNA, pseudomolecule Pd07.
AP019303.1:14618871-14618890
AACCGCGCCCACGGCCAATCACAACCGGAA14618871ACAGAGCACAGCATCGTCACAATCAACAACCCCGCCGGTCAAGCAAGAAC
Prunus mume strain koushuu saisyou clone P21 SSR marker genomic sequence.
GU458022.1:325-344
AAAACTCACTCAGTGGACCTCGATCACCTT325ACAGAGCACAGCATCGTCAC
Prunus mume strain gojrou clone P22 SSR marker genomic sequence.
GU458023.1:324-343
CAAGCTCACTCAGTGGACCTCGATCACCTT324ACAGAGCACAGCATCGTCAC
Leucania comma genome assembly, chromosome: 6.
OY282468.1:842636-842655
TATTAACGTCAGGAGCTCACTAGCACTGGC842636ACAGAGCACAGCATCGTCACGCCTCCTGGAGCCGCCCGCACAAACAATCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGACGATGCTGTGCTCTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGACGATGCTGTGCTCTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=GTGACGATGCTGTGCTCTGT&k=0&no_gap=0&offset=0&limit=50
0.416 | 0.315 | search_minus_done; http://172.18.8.135:50400/match?q=ACAGAGCACAGCATCGTCAC&k=0&no_gap=0&offset=0&limit=48
0.422 | 0.007 | cgi_end;

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