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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:51:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Salmo salar clone ssal-rgf-516-138 OX-2 membrane glycoprotein precursor putative mRNA, pseudogene cds.
BT072197.1:397-416
ACTTGTCTTACCGTTCAAGGTGTATCTGAA397GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
Coregonus sp. 'balchen' genome assembly, chromosome: 22.
LR778274.1:26514240-26514259
ATGTTTCATCTATTCTAAGGAGTATCTGAA26514240GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAACCTAAAGCAGACAT
SGP163554 Atlantic salmon Ovaries cDNA library Salmo salar cDNA clone KG4-0963 5', mRNA sequence.
CK891292.1:133-152
ACATGTCTTACCGTTCAAGGTGTATCTGAA133GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
ssalrgb514278_rev_0 mixed_tissue Salmo salar cDNA, mRNA sequence.
CX356452.1:393-412
ACTTGTCTTACCGTTCAAGGTGTATCTGAA393GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
SGP300451 Atlantic salmon Ovaries cDNA library Salmo salar cDNA clone KG4-2137 5', mRNA sequence.
DW339206.1:133-152
ACATGTCTTACCGTTCAAGGTGTATCTGAA133GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_ssal_rgb2_39633 rgb2 Salmo salar cDNA clone ssal_rgb2_564_175_rev 5', mRNA sequence.
DW575214.1:391-410
ACTTGTCTTACCGTTCAAGGTGTATCTGAA391GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGATAT
EST_ssal_evd_44877 ssalevd thymus Salmo salar cDNA Salmo salar cDNA clone ssal_evd_560_095_rev 3', mRNA sequence.
EG768993.1:321-340
CTGTTTCATCTATTCAAAGGTGTATCTGAA321GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_ssal_eve_39671 ssaleve thyroid Salmo salar cDNA Salmo salar cDNA clone ssal_eve_553_377_fwd 5', mRNA sequence.
EG827088.1:462-481
ACATGTCTTACCGTTCAAGGTGTATCTGAA462GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_otsh_evc_4336 otshevc mixed_tissue Oncorhynchus tshawytscha cDNA Oncorhynchus tshawytscha cDNA clone otsh_evc_010_258_fwd 3', mRNA sequence.
EL556167.1:125-144
ACGTGTCTTACCGTTCAAGGTGTATCTGAA125GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAACCTAAAGCAGACAT
EST_ssal_rgf_842922 ssalrgf mixed_tissue full-length Salmo salar cDNA Salmo salar cDNA clone ssal_rgf_516_138 5', mRNA sequence.
GE779277.1:401-420
ACTTGTCTTACCGTTCAAGGTGTATCTGAA401GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_ssal_rgf_843118 ssalrgf mixed_tissue full-length Salmo salar cDNA Salmo salar cDNA clone ssal_rgf_516_334 5', mRNA sequence.
GE779656.1:404-423
ACTTGTCTTACCGTTCAAGGTGTATCTGAA404GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_ssal_rgf_870948 ssalrgf mixed_tissue full-length Salmo salar cDNA Salmo salar cDNA clone ssal_rgf_522_324 5', mRNA sequence.
GE784003.1:457-476
ACATGTCTTACCGTTCAAGGTGTATCTGAA457GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_ssal_rgf_865056 ssalrgf mixed_tissue full-length Salmo salar cDNA Salmo salar cDNA clone ssal_rgf_531_192 5', mRNA sequence.
GE790138.1:403-422
ACTTGTCTTACCGTTCAAGGTGTATCTGAA403GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
EST_ssal_rgf_865783 ssalrgf mixed_tissue full-length Salmo salar cDNA Salmo salar cDNA clone ssal_rgf_532_151 5', mRNA sequence.
GE790779.1:395-414
ACTTGTCTTACCGTTCAAGGTGTATCTGAA395GTGAGAGCCACAATGCAAAAAGTCCCCAGCACTGAATCTAAAGCAGACAT
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:7387990-7388009
ATTTTCTCTAAATATTAAATCAAATAAGAA7387990GTGAGAGCCACAATGCAAAAATTTCAGTATTGTCCTATCGAATATTTTCA
Ctenicera cuprea genome assembly, chromosome: 2.
OY284487.1:36160825-36160844
AGCACATTTTACAGTTTAACACTGGATGTA36160825GTGAGAGCCACAATGCAAAACACGTACATTACTGGAAAAAGTTAAGAAAA
Meles meles genome assembly, chromosome: 11.
OV277452.1:67919932-67919951
GGAATGTATCTAGAAATCGCACTGAATATG67919932TTTTGCATTGTGGCTCTCACTAGGTAATTCTACTGGTGTGAATCATGGGA
Coregonus sp. 'balchen' genome assembly, chromosome: 22.
LR778274.1:26678574-26678593
ATGTCTGCTTTAGGTTCAGTGCTGGGGACT26678574TTTTGCATTGTGGCTCTCACTTCAGATACACCTTAGAATAGATGAAACAG
Coregonus sp. 'balchen' genome assembly, chromosome: 22.
LR778274.1:26727408-26727427
ATGTCTGCTTTAGGTTCAGTGCTGGGGACT26727408TTTTGCATTGTGGCTCTCACTTCAGATACTCCTTAGAATAGATGAAACAG
EST_ssal_evd_44878 ssalevd thymus Salmo salar cDNA Salmo salar cDNA clone ssal_evd_560_095_fwd 5', mRNA sequence.
EG768994.1:305-324
ATGTCTGCTTTAGATTCAGTGCTGGGGACT305TTTTGCATTGTGGCTCTCACTTCAGATACACCTTTGAATAGATGAAACAG
Citrus reshni phosphoenolpyruvate carboxylase gene, partial cds.
JX630067.1:501-520
TGAAAATATTCGATAGGACAATACTGAAAT501TTTTGCATTGTGGCTCTCACTTCTTATTTGATTTAATATTTAGAGAMAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGAGAGCCACAATGCAAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGAGAGCCACAATGCAAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.577 | 1.568 | search_plus_done; http://172.18.8.135:50400/match?q=GTGAGAGCCACAATGCAAAA&k=0&no_gap=0&offset=0&limit=50
1.732 | 0.155 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTGCATTGTGGCTCTCAC&k=0&no_gap=0&offset=0&limit=34
1.735 | 0.003 | cgi_end;

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