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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 19:23:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CGN-57588 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w18l5 5', mRNA sequence.
DV709318.1:189-215
CCCAATCCATCTTGAAATTGGATCATCCAA189GTGAGGAAACAAAAAACTAAACCGATTAAAACCTTCCTTGAGTGTTTAGCTAGTGGG
CGN-58857 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w27p11 5', mRNA sequence.
DV710341.1:189-215
CCCAATCCATCTTGAAATTGGATCATCCAA189GTGAGGAAACAAAAAACTAAACCGATTAAAACCTTCCTTGAGTGTTTAGCTAGTGGG
AFP0ABA27YE09RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO612128.1:623-649
ACCATTTCATCTTGAAATTGAATCATCCAA623GTGAGGAAACAAAAAACTAAACCGATTAAAACCTTCCTTGAGTGTTTAGCTAGTGGT
AFP0ABA10YF22RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO624756.1:601-627
CTAGCTAAACACTCAAGGAAGGTTGGTTTT601AATCGGTTTAGTTTTTTGTTTCCTCACTTGGATGATCCAAATTCAAGATGGATTAGG
AFP0ABA38YN03RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO632669.1:601-627
CTAGCTAAACACTCAAGGAAGGTTGGTTTT601AATCGGTTTAGTTTTTTGTTTCCTCACTTGGATGATCCAAATTCAAGATGGATTAGG
AFP0ABA56YC03FM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO648446.1:601-627
CTAGCTAAACACTCAAGGAAGGTTGGTTTT601AATCGGTTTAGTTTTTTGTTTCCTCACTTGGATGATCCAAATTCAAGATGGATTAGG
AFP0ABA72YD10RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO665584.1:597-623
ACCAGTAGCTAAACACTCAAGGAAGGTTTT597AATCGGTTTAGTTTTTTGTTTCCTCACTTGGATGATCCAAA

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