GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:50:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Neolamprologus multifasciatus genome assembly, chromosome: 12.
OY755025.1:8147702-8147721
TGTTATCAATCCCCTTAGAGATTGCAGGGA8147702GTGAGTGGTGGGAGGTAGATTGAGGTCCAGCTTGCTCTGTCCAGCACTGA
TSA: Camellia sinensis tea_c4701 mRNA sequence.
KA284118.1:1025-1044
TAGACAAGTATGGGGAGTTTTGTGGTGGTG1025GTGAGTGGTGGGAGGTAGATGCGGGCGGTGACGCCGGTGGAGGGTGAGAT
Triticum aestivum genome assembly, chromosome: 2B.
LR862512.1:58811445-58811464
TTGTTCGGTACGCGGCGGTCGGGCGCCATG58811445GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR862533.1:56600760-56600779
TTGTTCGGTACGCGGCGGTCGGGCGCCATG56600760GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR862554.1:59183559-59183578
TTGTTCGGTACGCGGCGGTCGGGCGCCATG59183559GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR865462.1:55677058-55677077
TTGTTCGGTACGCGGCGGTCGGGCGCCATG55677058GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR865483.1:57628513-57628532
TTGTTCGGTACGCGGCGGTCGGGCGCCATG57628513GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR865504.1:56225554-56225573
TTGTTCGGTACGCGGCGGTCGGGCGCCATG56225554GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR865743.1:58825757-58825776
TTGTTCGGTACGCGGCGGTCGGGCGCCATG58825757GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR877313.1:52553063-52553082
TTGTTCGGTACGCGGCGGTCGGGCGCCATG52553063GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LR878439.1:56942622-56942641
TTGTTCGGTACGCGGCGGTCGGGCGCCATG56942622GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
LS992084.1:53852226-53852245
TTGTTCGGTACGCGGCGGTCGGGCGCCATG53852226GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
OU343177.1:67592691-67592710
TTGTTCGGTACGCGGCGGTCGGGCGCCATG67592691GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Triticum aestivum genome assembly, chromosome: 2B.
OU963876.1:58712764-58712783
TTGTTCGGTACGCGGCGGTCGGGCGCCATG58712764GTGAGTGGTGGGAGGTAGATGGAGGGTGCAGCAATGGAGGATCGTCTCGT
Orthosia gothica genome assembly, chromosome: 26.
OX459060.1:18480834-18480853
CACGTGCCGGACGCGCCCGGACGTCACACG18480834GTGAGTGGTGGGAGGTAGATGTTTATCTTGATTGACTTCGAGATAGTTTG
Astatotilapia calliptera genome assembly, chromosome: 12.
LS420030.2:30194491-30194510
TCAGTGCTGGACAGAGCAAGCTGGACCTCT30194491ATCTACCTCCCACCACTCACTCCCTGCAATCTCTAAGGGGATTGATAACA
SDSS2_65 SDSS2 Camellia sinensis var. sinensis cDNA clone P65 5', mRNA sequence.
GH710894.1:302-321
ATCTCACCCTCCACCGGCGTCACCGCCCGC302ATCTACCTCCCACCACTCACCACCACCACAAAAAAAAAAAAAAAAAAAAA
Tea010_2005-10-30_1/Tea010_C05_022_1 Camellia sinensis (tea) cultivar DT1 EST library Camellia sinensis cDNA, mRNA sequence.
JK478934.1:256-275
ATCTCACCCTCCACCGGCGTCACCGCCCGC256ATCTACCTCCCACCACTCACCACCACCACAAAAAAAAAAAAAAAAAAAAA
Triticum aestivum genome assembly, chromosome: 2B.
LR865764.1:53893024-53893043
ACGAGACGATCCTCCATTGCTGCACCCTCC53893024ATCTACCTCCCACCACTCACCATGGCGCCCGACCGCCGCGTACCGAACAA
Macrobrachium nipponense isolate FS-2020 chromosome 20.
CP062037.1:50569893-50569912
CCCACATCTCCAACGCCCTTTCCCCTCCCC50569893ATCTACCTCCCACCACTCACACCTCACCCCAAGTCTAATATACATCAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGAGTGGTGGGAGGTAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGAGTGGTGGGAGGTAGAT | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.382 | 0.374 | search_plus_done; http://172.18.8.135:50400/match?q=GTGAGTGGTGGGAGGTAGAT&k=0&no_gap=0&offset=0&limit=50
0.679 | 0.297 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTACCTCCCACCACTCAC&k=0&no_gap=0&offset=0&limit=35
0.683 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).