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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-25 17:37:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
AP015040.1:706391-706410
ATCATCCATATGAGGGAAGAGAGGGCGAAG706391GTGATCGATGAGGGAAGGAAGAGAGAGGCGAATTGGGGAAGATGAACAGC
Nomada panzeri genome assembly, chromosome: 4.
OX637833.1:10412197-10412216
CCGTTGATATTTCTTTCTTGATCGCGTCGC10412197GTGATCGATGAGGGAAGGAAGGTTAGGGGTGACGTGAAAATTACACGAAG
Vigna angularis mRNA, clone: VEPS03F13.
HX939696.1:238-257
GCTGTTCATCTTCCCCAATTCGCCTCTCTC238TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Vigna angularis mRNA, clone: VEPS10_O13.
HX942445.1:296-315
GCTGTTCATCTTCCCCAATTCGCCTCTCTC296TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Vigna angularis mRNA, clone: VES07M09.
HX945016.1:252-271
GCTGTTCATCTTCCCCAATTCGCCTCTCTC252TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Vigna angularis mRNA, clone: VES07P16.
HX945095.1:252-271
GCTGTTCATCTTCCCCAATTCGCCTCTCTC252TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Vigna angularis mRNA, clone: VES11I19.
HX946442.1:358-377
GCTGTTCATCTTCCCCAATTCGCCTCTCTC358TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Vigna angularis mRNA, clone: VES18G11.
HX949024.1:257-276
GCTGTTCATCTTCCCCAATTCGCCTCTCTC257TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Vigna angularis mRNA, clone: VES18H13.
HX949050.1:257-276
GCTGTTCATCTTCCCCAATTCGCCTCTCTC257TTCCTTCCCTCATCGATCACCTTCGCCCTCTCTTCCCTCATATGGATGAT
Cryptocephalus primarius genome assembly, chromosome: 10.
OY754946.1:3444806-3444825
CTCTGGATTGTAACCTTTGGACCTTTCCCC3444806TTCCTTCCCTCATCGATCACAATTTAATACTTGCGGTTTGTTTTAACCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGATCGATGAGGGAAGGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGATCGATGAGGGAAGGAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.379 | 0.371 | search_plus_done; http://172.18.8.135:50400/match?q=GTGATCGATGAGGGAAGGAA&k=0&no_gap=0&offset=0&limit=50
1.183 | 0.804 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCTTCCCTCATCGATCAC&k=0&no_gap=0&offset=0&limit=48
1.189 | 0.005 | cgi_end;

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