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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 09:48:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Arachis hypogaea CL1Contig3539.Arhy mRNA sequence.
EZ724523.1:764-783
GCTGAAATGATTACCCAAGTGTCTGATAGT764GTGATTCCTGCGTTCAAGTCTGCGGCCGAGGAGTCTTTTAGAA
TSA: Arachis duranensis Aduranensis_small_rep_c2051_2 mRNA sequence.
JR342472.1:156-175
GCTGAAATGATTACCCAAGTGTCTGATAGT156GTGATTCCTGCGTTCAAGTCTGCGGCCGAGGAGCTTTTGAACAACTCTGG
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:149513902-149513921
TCTAATGCTAACATATGTCATGTGCACAGT149513902GTGATTCCTGCGTTCAAGTCTGCGGCTGAGGAGCTTTTGAACAACTCTGG
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:157037497-157037516
TCTAATGCTAACATATGTCATGTGCACAGT157037497GTGATTCCTGCGTTCAAGTCTGCGGCTGAGGAGCTTTTGAACAACTCTGG
Arachis hypogaea EST, cultivar Minhua6, clone GAYHEI101ALAJ2.
LN673621.1:95-114
ACCAGAGTTGTTCAAAGCTCCTCGGCCGCA95GACTTGAACGCAGGAATCACACTATCAGACACTTGGGTAATCATTTCAGC
TSA: Arachis hypogaea CL1Contig712.Arhy mRNA sequence.
EZ721696.1:960-979
CCAGAGTTGTTCAAAAGCTCCTCGGCCGCA960GACTTGAACGCAGGAATCACACCCCGGCCGGTTGGAACCGAAAGGGTTTG
TSA: Arachis duranensis DurSNP_c18792.Ardu mRNA sequence.
HP018773.1:188-207
CCAGAGTTGTTCAAAAGCTCCTCGGCCGCA188GACTTGAACGCAGGAATCACACCCCGGCGTACTTGGGTAATCATTTCAGC
TSA: Arachis hypogaea Ahy.Unigene9439 mRNA sequence.
JR549833.1:232-251
CCAGAGTTGTTCAAAAGCTCCTCGGCCGCA232GACTTGAACGCAGGAATCACACTATCAGACACTTGGGTAATCATTTCAGC
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:86359835-86359854
CCAGAGTTGTTCAAAAGCTCCTCGGCCGCA86359835GACTTGAACGCAGGAATCACACTGTGCACATGACATATGTTAGCATTAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGATTCCTGCGTTCAAGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGATTCCTGCGTTCAAGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.310 | 0.301 | search_plus_done; http://172.18.8.135:50400/match?q=GTGATTCCTGCGTTCAAGTC&k=0&no_gap=0&offset=0&limit=50
0.518 | 0.208 | search_minus_done; http://172.18.8.135:50400/match?q=GACTTGAACGCAGGAATCAC&k=0&no_gap=0&offset=0&limit=46
0.521 | 0.003 | cgi_end;

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