GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:11:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

EG-A11_010_D12 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600371.1:152-171
TCTCCTCCTCCTGGTCCTACTGCTGCTGTA152GTGGAATCAGCTGCCAAATCGCCGGCCGCAGACGGAGGAACGAACGAACC
Elaeis guineensis EST, clone (6lib)_isotig27303.
LM620165.1:1392-1411
GGTTCGTTCGTTCCTCCGTCTGCGGCCGGC1392GATTTGGCAGCTGATTCCACTACAGCAGCAGTAGGACCAGGAGGAGGAGA
Niabella ginsenosidivorans strain BS26 chromosome, complete genome.
CP015772.1:2826164-2826183
TTATAATGCAGAATAAATTTGGAATATTCT2826164GATTTGGCAGCTGATTCCACCAGTAATTCATCTAAAGCTGTACCTAAGGT
Acleris literana genome assembly, chromosome: Z.
OX335668.1:48306265-48306284
TACAATTTGTCATAAATTCTCTGAATTTAG48306265GATTTGGCAGCTGATTCCACGGAATGTTGGAATGGACTAAAAAAGCTGTT
Toxonevra muliebris genome assembly, chromosome: 2.
OY829327.1:26508248-26508267
CACACACTTTATGTACACAATATGATTTTT26508248GATTTGGCAGCTGATTCCACAATTAAAATGAGAGCAATATGTTAGATGCG
Phania funesta genome assembly, chromosome: 2.
OZ010653.1:111468574-111468593
TTGTCATGAGTGATTGAAGGATTAACTACA111468574GATTTGGCAGCTGATTCCACGATATGACTAATACAGGCTTCTAACATCGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGGAATCAGCTGCCAAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGGAATCAGCTGCCAAATC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.318 | 0.310 | search_plus_done; http://172.18.8.135:50400/match?q=GTGGAATCAGCTGCCAAATC&k=0&no_gap=0&offset=0&limit=50
0.488 | 0.170 | search_minus_done; http://172.18.8.135:50400/match?q=GATTTGGCAGCTGATTCCAC&k=0&no_gap=0&offset=0&limit=49
0.492 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).