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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 12:22:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: X.
OX460417.1:33402168-33402187
ATCCAATCAATGAGAGAGAAGAGAGATTCT33402168GTGGACAGGGGACATTGAGATCATGATGGGAAAACCTGCAGAGATGACCA
Peromyscus eremicus genome assembly, chromosome: X.
OX460489.1:40229557-40229576
ATCCAATCAATGAGAGAGAAGAGAGATTCT40229557GTGGACAGGGGACATTGAGATCATGATGGGAAAACCTGCAGAGATGACCA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:28131224-28131243
GCTCTTCCACATTGCCAATGTGTTGCGCAG28131224GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27631011-27631030
GCTCTTCCACATTGCCAATGTGTTGCGCAG27631011GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27904711-27904730
GCTCTTCCACATTGCCAATGTGTTGCGCAG27904711GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:27645273-27645292
GCTCTTCCACATTGCCAATGTGTTGCGCAG27645273GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:28591080-28591099
GCTCTTCCACATTGCCAATGTGTTGCGCAG28591080GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:27466219-27466238
GCTCTTCCACATTGCCAATGTGTTGCGCAG27466219GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:26599165-26599184
GCTCTTCCACATTGCCAATGTGTTGCGCAG26599165GTGGACAGGGGACATTGAGAACGTTGGGATCTTGGATGCAAAGTGTTTTG
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: II.
OX377202.1:8781262-8781281
GTCGTGAATGGGTTAAAGAAAAAACAACGG8781262GTGGACAGGGGACATTGAGATGAAATGTGTATCAGCGGATGCAGCTTTGA
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: X.
OX377206.1:79556457-79556476
GTCGTGAATGGGTTAAAGAAAAAACAACGG79556457GTGGACAGGGGACATTGAGATGAAATGTGTATCAGCGGATGCAGCTTTGA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:25146060-25146079
CAAAACACTTTGCATCCAAGATCCCAACGT25146060TCTCAATGTCCCCTGTCCACCTGCGCAACACATTAGCAATGTGGAAGAGC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:25630622-25630641
CAAAACACTTTGCATCCAAGATCCCAACGT25630622TCTCAATGTCCCCTGTCCACCTGCGCAACACATTAGCAATGTGGAAGAGC
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:25219552-25219571
CAAAACACTTTGCATCCAAGATCCCAACGT25219552TCTCAATGTCCCCTGTCCACCTGCGCAACACATTGGCAATGTGGAAGAGC
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: IV.
OX377201.1:85913644-85913663
TCAAAGCTGCATCCGCTGATACACATTTCA85913644TCTCAATGTCCCCTGTCCACCCGTTGTTTTTTCTTTAACCCATTCACGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGGACAGGGGACATTGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGGACAGGGGACATTGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=GTGGACAGGGGACATTGAGA&k=0&no_gap=0&offset=0&limit=50
0.297 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCAATGTCCCCTGTCCAC&k=0&no_gap=0&offset=0&limit=39
0.300 | 0.003 | cgi_end;

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