GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:38:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RCLE133TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLE133, mRNA sequence.
EG657434.1:231-252
TATTAATGAGAAGGAATCAATGGTCGATCC231CTTCTTAGTCGAGGCTCTCCACAACCCATCTCATCGTCTCACCATTTTAAGG
RCLEX26TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLEX26, mRNA sequence.
EG658836.1:104-125
TATTAATGAGAAGGAATCAATGGTCGATCC104CTTCTTAGTCGAGGCTCTCCACAACCCATCTCATCGTCTCACCATTTTAAGG
RCLFO06TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLFO06, mRNA sequence.
EG661298.1:127-148
TATTAATGAGAAGGAATCAATGGTCGATCC127CTTCTTAGTCGAGGCTCTCCACAACCCATCTCATCGTCTCACCATTTTAAGG
RCLFW17TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLFW17, mRNA sequence.
EG662054.1:231-252
TATTAATGAGAAGGAATCAATGGTCGATCC231CTTCTTAGTCGAGGCTCTCCACAACCCATCTCATCGTCTCACCATTTTAAGG
RCLG759TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLG759, mRNA sequence.
EG663122.1:231-252
TATTAATGAGAAGGAATCAATGGTCGATCC231CTTCTTAGTCGAGGCTCTCCACAACCCATCTCATCGTCTCACCATTTTAAGG
RCLGH22TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLGH22, mRNA sequence.
EG664049.1:220-241
TATTAATGAGAAGGAATCAATGGTCGATCC220CTTCTTAGTCGAGGCTCTCCACAACCCATCTCATCGTCTCACCATTTTAAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGGAGAGCCTCGACTAAGAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGGAGAGCCTCGACTAAGAAG | format : html | download : | debug : 

0.016 | 0.016 | search_start;
0.164 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=GTGGAGAGCCTCGACTAAGAAG&k=0&no_gap=0&offset=0&limit=50
0.534 | 0.370 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCTTAGTCGAGGCTCTCCAC&k=0&no_gap=0&offset=0&limit=50
0.543 | 0.008 | cgi_end;

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