GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 04:49:33, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo subsp. melo EST, clone PSI_10-A04-M13R.
AM720912.2:499-518
AGGGCTTGTCTTTGTGTTTGCCCTTTTTAA499GTGGGTCATCATTATTGTTATTAAATTTAGTTGAAAAGTCAAAACCAAAT
Cucumis melo CM-ACO1 gene for ACC oxidase, complete cds.
AB522604.1:3034-3053
AGGGCTTGTCTTTGTGTTTGCCCTTTTTAA3034GTGGGTCATCATTATTGTTATTAAATTTAGTTGAAAAGTCAAAACCAAAT
Cucumis sativus ACC oxidase gene, promoter region and complete cds.
AY450356.1:2200-2219
GGGTCATTATGTGTTATTAAATTTAATTAA2200GTGGGTCATCATTATTGTTATTAGAGCTCG
Cucumis melo mRNA for 1-aminocyclopropane-1-carboxylate oxidase, complete cds.
D31727.1:1108-1127
AGGGCTTGTCTTTGTGTTTGCCCTTTTTAA1108GTGGGTCATCATTATTGTTATTAAATTTAGTTGAAAAGTCAAAACCAAAT
C.melo mRNA for ethylene-forming enzyme.
X69935.1:1057-1076
TATTAGAGGGCTTGTGTTTGCCCTTTTTAA1057GTGGGTCATCATTATTGTTATTAAATTTAGTGAAAAGTCAAAACCAAATA
C.melo ACC oxidase gene (clone CM-ACO1).
X95551.1:2192-2211
AGGGCTTGTGTTTGTGTTTGCCCTTTTTAA2192GTGGGTCATCATTATTGTTATTAAATTTAGTTGAAAAGTCAAAACCAAAT
5_Tge_b3v08.
OE839929.1:24863-24882
ATTGGTTTCAAAATTCATGTACCCACCAAT24863GTGGGTCATCATTATTGTTAATATCAATATAATTGGAATTAATTACACAG
Cupido argiades genome assembly, chromosome: 17.
OZ195129.1:8484104-8484123
CTGAAACCGGCCATCTTGGCCGAGATCGGT8484104GTGGGTCATCATTATTGTTATAATATTATCATATACTAATTTTTTCATTC
Lissotriton vulgaris genome assembly, chromosome: 5.
OZ183357.1:463495882-463495901
CACTGGTTTTATAGTATGTTTTGTCTTCAA463495882GTGGGTCATCATTATTGTTATTTAATTGTACATACATTTTTTTAAACATT
EST11053082 VFTP2 library Cucumis melo cDNA clone HA4YE18RM1, mRNA sequence.
JG511369.1:153-172
ATTTGGTTTTGACTTTTCAACTAAATTTAA153TAACAATAATGATGACCCACTTAAAAAGGGCAAACACAAAGACAAGCCCT
Cinnamomum chago isolate CC202301 chromosome 10.
CP142460.1:39978569-39978588
TAATTTGTTGATTGAAGACACACGATCAAT39978569TAACAATAATGATGACCCACTAGATCAAATGAAGGTTGTTTTTATGATAC
4_Tbi_b3v08.
OD565122.1:39737-39756
CTGTGTAATTAATTCCAATTATATTGATAT39737TAACAATAATGATGACCCACATTGGTGGGTACATGAACTTTGAAACCAAT
4_Tte_b3v08.
OE000785.1:64157-64176
CTGTGTAATTAATTCCAATTATATTGATAT64157TAACAATAATGATGACCCACATTGGCGGGTACATGAACTTTGAAACCAAT
Schistosoma mansoni strain Puerto Rico genome assembly, chromosome: PAR2.
OU426850.1:4235555-4235574
GAATACTTCATCAATATCTGTTTCTAATTG4235555TAACAATAATGATGACCCACCATGTACAACTTTATCACGTGTTTTAAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGGGTCATCATTATTGTTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGGGTCATCATTATTGTTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.143 | 0.134 | search_plus_done; http://172.18.8.135:50800/match?q=GTGGGTCATCATTATTGTTA&k=0&no_gap=0&offset=0&limit=50
0.326 | 0.183 | search_minus_done; http://172.18.8.135:50800/match?q=TAACAATAATGATGACCCAC&k=0&no_gap=0&offset=0&limit=41
0.330 | 0.003 | cgi_end;

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