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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 04:12:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rangifer tarandus platyrhyncus genome assembly, chromosome: 4.
OX459940.2:18412126-18412143
CTGAGGTGGCGAAGGTCTAGAATTACCTCT18412126GTGGTGGAGGTAAGACTGGCAGTACCTGGCATGTAGTGCACAGCCAGG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 3.
OX596087.1:16696350-16696367
CTGAGGTGGCGAAGGTCTAGAATTACCTCT16696350GTGGTGGAGGTAAGACTGGCAGTACCTGGCATGTAGTGCACAGCCAGG
Martes martes genome assembly, chromosome: 1.
OY734063.1:112094897-112094914
GCAACTTATCCCAGATCATACAAATGGTGT112094897GTGGTGGAGGTAAGACTGAAATGAGCAGAGCCTTATTCAAAAATCTGC
Pipistrellus nathusii genome assembly, chromosome: 3.
OY882860.1:109739362-109739379
GATAGACAGTAGATGCCTATTAGACAGTAA109739362GTGGTGGAGGTAAGACTGTTCATTTACGATATGGGAGGGAAGATCTAT
Pipistrellus nathusii genome assembly, chromosome: 3.
OY883180.1:109692086-109692103
GATAGACAGTAGATGCCTATTAGACAGTAA109692086GTGGTGGAGGTAAGACTGTTCATTTACGATATGGGAGGGAAGATCTAT
Vespertilio murinus genome assembly, chromosome: 4.
OZ004707.1:113331181-113331198
CTATAGACAGTAGGTGCTGATAGACAGTAG113331181GTGGTGGAGGTAAGACTGTTCATTTATGACCTGGAAGGGAAGATCCAT
Scleropages formosus genome assembly, chromosome: 8.
LR584073.1:9077908-9077925
GTACTGTCCTGACCGCATAGAGGCTCCGTG9077908GTGGTGGAGGTAAGACTGATGGAGATGTAGGTGGAAACAGAGTTATAC
Electrona antarctica genome assembly, chromosome: 18.
OX578263.1:26904523-26904540
ATGCTGACCAGATAGGGATATCCACTAGAT26904523GTGGTGGAGGTAAGACTGCTGTTTCCTCAGGTCTTTCAGAGGGCAACT
Sardina pilchardus genome assembly, chromosome: 19.
OY974104.1:8410612-8410629
ACGGCCTCACTCGAGGAGGAGGAGGAGGAG8410612GTGGTGGAGGTAAGACTGTTTGCTTCAACATTCTTGCTGTACTGTTTA
RTWW1_6_H07.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone RTWW1_6_H07_A015 5', mRNA sequence.
CF400639.1:54-71
TGCAACAGTCTGCTCAGCCTGTTGGCTTGG54GTGGTGGAGGTAAGACTGCCGCCGCCACCGCCGCCACCACCAACAGTA
WS00950.B21_M07 IS-B-N-A-10 Picea engelmannii x Picea glauca cDNA clone WS00950_M07 3, mRNA sequence.
DR470479.1:268-285
AGCAACAGACTGCTCAGCCTGTTGGCTTGG268GTGGTGGAGGTAAGACTGCCGCTGCCGCCGCCGCCGCCGCCGCCGCCA
EST1077249 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWABO12 3' end, mRNA sequence.
DR687171.1:288-305
AGCAACAGTCTGCTCAGCCTGTTGGCTTGG288GTGGTGGAGGTAAGACTGCCGCCGCGACCGCCGCCACCACCAACAGTA
PCO0134.C21_O11 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0134_O11 5', mRNA sequence.
GT236562.1:70-87
AGCAACAGTCTGCTCAGCCTGTTGGCTTGG70GTGGTGGAGGTAAGACTGCCGCCGCCACCGCCGCCACCACCAACAGTA
S237P6422FE12.T0 PortugueseWaterDog Canis familiaris STS genomic, sequence tagged site.
BV442033.1:94-111
CCATGTGCTTCCTGGGCGTGAAGAGGAAAT94GTGGTGGAGGTAAGACTGGAACACGGGCAGGACCATAGAAATGAGGCT
Drosophila busckii chromosome 3L sequence.
CP012525.1:6320036-6320053
ACGGATACCAATGACTCCTGCTCTGTGGAG6320036GTGGTGGAGGTAAGACTGGCATCCTGACTGGGCTGACTGAGCAGACTG
Chrysoteuchia culmella genome assembly, chromosome: 1.
OU342642.1:7538617-7538634
AAATATAATAGAATAAAGAAATTACGGCTC7538617GTGGTGGAGGTAAGACTGCTTGAAGATCATAACATGCAACCACATAGT
Amphipyra berbera genome assembly, chromosome: 3.
OU343124.1:1641609-1641626
TGTGTGTGTGGGGTGAGCGAATGTGTATGG1641609GTGGTGGAGGTAAGACTGTGTGTGTTGTGATTAGCATTTATTCAGATT
Sarcophaga caerulescens genome assembly, chromosome: 2.
OV656873.1:18846715-18846732
TTGCCAGTGGTGGTGGTGGTGTTTGTGGTG18846715GTGGTGGAGGTAAGACTGTTGCTAAGGCTGTGGCTATGGTTATTGTTG
Agapetus fuscipes genome assembly, chromosome: 25.
OX637357.1:11394539-11394556
CGAAAGCTTGGAAACCCAACATCAACTGAA11394539GTGGTGGAGGTAAGACTGGACCCCTTACCTGTAAAAATAACAGGTTCA
Timandra comae genome assembly, chromosome: 26.
OY292379.1:1664645-1664662
GCGGCGGCGGCGGGAGGGGGTTCGGAGGTC1664645GTGGTGGAGGTAAGACTGGTTATAATTGTTATAAACTAGATGTTGTTA
Sciurus carolinensis genome assembly, chromosome: 3.
LR738592.1:103002402-103002419
GTTTTTTGGTTTTGTTTTTGTTTTTTGTTT103002402CAGTCTTACCTCCACCACCTCCTCATATTCTTCGTCATCTGCCATTTT
Sciurus vulgaris genome assembly, chromosome: 3.
LR738613.1:106854349-106854366
GTTTTTTGGTTTTGTTTTTGTTTTTTGTTT106854349CAGTCTTACCTCCACCACCTCCTCATATTCTTCGTCATCTGCCATTTT
Sciurus vulgaris genome assembly, chromosome: 5.
LR738615.1:111369517-111369534
AGCTGGCTGGCACAACCCCAGCTTTACTGG111369517CAGTCTTACCTCCACCACTTGATGGAACTGGTCCCTCACGTTTCCAGA
Acomys dimidiatus genome assembly, chromosome: 7.
OU015380.1:49771309-49771326
TGGTCTTTCTCAAGGCTGTATGTGTCACTT49771309CAGTCTTACCTCCACCACCCTCTGTTGTTATCTTTGTGTGTCTTTGTC
Apodemus sylvaticus genome assembly, chromosome: 15.
OX359312.1:7038472-7038489
CCTGCAGGGGTGTGTCAACATGGCTGGCCA7038472CAGTCTTACCTCCACCACCCATGAGATCCTGACCCCAGAGATCCACCA
Canis lupus familiaris breed Labrador retriever chromosome 03a.
CP050599.1:66855948-66855965
AGCCTCATTTCTATGGTCCTGCCCGTGTTC66855948CAGTCTTACCTCCACCACATTTCCTCTTCACGCCCAGGAAGCACATGG
Canis lupus familiaris breed Labrador retriever chromosome 03b.
CP050627.1:66829391-66829408
AGCCTCATTTCTATGGTCCTGCCCGTGTTC66829391CAGTCTTACCTCCACCACATTTCCTCTTCACGCCCAGGAAGCACATGG
Canis lupus genome assembly, chromosome: 3.
HG994384.1:59121821-59121838
AGCCTCATTTCTATGGTCCTGCCCGTGTTC59121821CAGTCTTACCTCCACCACATTTCCTCTTCACGCCCAGGAAGCACATGG
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:79133664-79133681
ATGGATCTTCCCTCCCAGGTTGTAAATGAA79133664CAGTCTTACCTCCACCACCTACTGTCTATAGGCACCTACTGTCTATCG
Meles meles genome assembly, chromosome: 11.
OV277452.1:34230668-34230685
CTAATTGTCTATAAATACAGGAGAGCATTT34230668CAGTCTTACCTCCACCACTGACTTAGTATGTGACCTTGACTAAGTTAG
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:81790579-81790596
ATGGATCTTCCCTCCCAGGTCGTAAATGAA81790579CAGTCTTACCTCCACCACCTACTGTCTATAGGCACCTACTGTCTACCG
Martes martes genome assembly, chromosome: 1.
OY734063.1:127713413-127713430
GGTACAAAATTGTTAACTGATGAATATCCC127713413CAGTCTTACCTCCACCACCCACACTACCAAGTTCCAAGTGTGCCTGCC
Muntiacus reevesi genome assembly, chromosome: 3.
OZ005626.1:86291044-86291061
CCTGGCGGTGCACTCCATGCCGGGTACTGC86291044CAGTCTTACCTCCACCACAGAGGTAATTCTAGACCTTCGCCACCTCAG
Electrona antarctica genome assembly, chromosome: 4.
OX578249.1:1671968-1671985
AGTTGCCCTCTGAAAGACCTGAGGAAACAG1671968CAGTCTTACCTCCACCACATCTGGATATCCCTATCTGGTCAGCATATA
Electrona antarctica genome assembly, chromosome: 9.
OX578254.1:46287276-46287293
AGTTGCCCTCTGAAAGACCTGAGGAAACAG46287276CAGTCTTACCTCCACCACACCCGAATATCCTTATCTGGTCAGCATATA
Pinus kesiya var. langbianensis microsatellite 13100F127 sequence.
KX694032.1:1270-1287
TACTGTTGGTGGTGGCGGCGGTGGCCGCGG1270CAGTCTTACCTCCACCACCCAAGCCAACAGGCTGAGCAGACTGTTGCT
Carcina quercana genome assembly, chromosome: 2.
OU342428.1:3352733-3352750
ACAGCAAAGACAAGTGTGTTCCCACGCTGA3352733CAGTCTTACCTCCACCACTAAAGGAAAGGGAGGACAAGTGCTAGCTTG
Agriphila tristella genome assembly, chromosome: 14.
OV743443.1:19735295-19735312
TTATAATTAATGCATTATGAAATAATGATA19735295CAGTCTTACCTCCACCACAAGTTAATATAAAAAATACATGTAAAGATA
Protocalliphora azurea genome assembly, chromosome: 2.
OW026520.1:17513497-17513514
TACCCTTGCCGTTACCAATTTTACCGTCTC17513497CAGTCTTACCTCCACCACTCTTCAAAATAATTTATTAAATAAATTGGA
Ostrea edulis genome assembly, chromosome: 4.
OX387707.1:90482488-90482505
TCAGGCAGTAATCCACAGCTATGAACACTG90482488CAGTCTTACCTCCACCACACCTGGAAACAGACAGATGATTTACACATA
Xanthia icteritia genome assembly, chromosome: 23.
OX421953.2:9370700-9370717
GGGTCGTCAGAAGCCCGAAAGTCTGACAGC9370700CAGTCTTACCTCCACCACCCAGTTACTGGGTGGTGGAGGTCAGATAAA
Diarsia brunnea genome assembly, chromosome: 24.
OX459020.1:12817343-12817360
GAACACCAGTATTTTACATGGAGCGACTGC12817343CAGTCTTACCTCCACCACCCAGTTAGTAACGTATAACTTTTCCACAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGGTGGAGGTAAGACTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGGTGGAGGTAAGACTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.737 | 0.728 | search_plus_done; http://172.18.8.135:50400/match?q=GTGGTGGAGGTAAGACTG&k=0&no_gap=0&offset=0&limit=50
0.894 | 0.157 | search_minus_done; http://172.18.8.135:50400/match?q=CAGTCTTACCTCCACCAC&k=0&no_gap=0&offset=0&limit=30
0.908 | 0.014 | cgi_end;

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