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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:39:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

64-L105746-1033-033-P16-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-033-P16 3', genomic survey sequence.
JY283748.1:24-45
TACACTGTGATCTCCACATCATA24GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
41-L105200-1033-009-A11-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-009-A11 3', genomic survey sequence.
JY290390.1:147-168
TTTTGGATACACTATGATCTCCACATCATA147GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
50-L106966-1033-074-D14-ccfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-074-D14 5', genomic survey sequence.
JY306352.1:500-521
TTTTGGATACACTGTGATCTCCATATCATA500GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
63-L107169-1033-079-N15-ccfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-079-N15 5', genomic survey sequence.
JY336530.1:381-402
TTTTGGATACACTATGATCTCCACATCATA381GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
33-L108510-1033-134-A09-ccfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-134-A09 5', genomic survey sequence.
JY360548.1:123-144
TTTTGGATACGCTGTGATATTCACATCATA123GTGTAGGGGTTGAATATAGGTCTAATGAACTGACTAAAGAATTCGGTATAAA
83-L108786-1033-140-E22-ccfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-140-E22 5', genomic survey sequence.
JY361309.1:425-446
TTTTGGATACACTGTGATCTCCACATCATA425GTGTAGGGGTTGAATATAGGTCTAAGGAATTGACTAAAGAGTTAGGTATAAA
54-L110272-1033-189-L13-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-189-L13 3', genomic survey sequence.
JY397818.1:163-184
TTTTGGATACACTGTGATCTCCATATCATA163GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:35353852-35353873
TTTTGGATACACCGTGATCTCCACATCATA35353852GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:28360608-28360629
TTTTGGATACACTGTGATCTCCACATCATA28360608GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:31282809-31282830
TTTTGGATACACTATGATCTCCACATCATA31282809GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:31614985-31615006
TTTTGGATACACTGTGATCTCCACATCATA31614985GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:36819888-36819909
TTTGGATACACTCGTGATCTCCACATCATA36819888GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:24875751-24875772
TTTTGGATACACTGTGATCTCCACATCATA24875751GTGTAGGGGTTGAATATAGGTCTAATGAATTGACAAACGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:32960668-32960689
TTTTGGATACACTGTGATCTCCACATCATA32960668GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTATGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:42112435-42112456
TTTTGGATACACTGTGATCTACACATCATA42112435GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:42116697-42116718
TTTGGATACACCTGTGATCTACACATCATA42116697GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:6035416-6035437
TTTTGGATACACTGTGATCTCCATATCATA6035416GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGATATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:32959600-32959621
TTTTGGATACACTGTGATCTCCATATCATA32959600GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:48352797-48352818
TTTTGGATACACTGTGATCTCCACATCATA48352797GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAAGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 9.
OX392555.1:19367428-19367449
TTTTGGATACGCTGTGATCTTCACATCATA19367428GTGTAGGGGTTGAATATAGGTCTAATGAACTGACTAAAGAGTTAGGTGTAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 9.
OX392555.1:38844687-38844708
TTTTGGATACGATGTGATCTCCATATAATA38844687GTGTAGGGGTTGAATATAGGTCTAATGGATTGCTTAAAGAGTTATGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:34452566-34452587
TTTTGGATACACTATGATCTCCACATCATA34452566GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392559.1:33036020-33036041
TTTTGGATACACTGTGATCTCCACATCATA33036020GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGTTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392560.1:43546502-43546523
TTTTGGATACACTATGATCTCCACATCATA43546502GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392560.1:43550808-43550829
TTTTGGATACACTATGATCTCCACATCATA43550808GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:37004729-37004750
TTTTGGATACACTGTGATCTCCACATCATA37004729GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:29740154-29740175
TTTTGGATACACTGTGATCTCCACATCATA29740154GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:43876572-43876593
TTTTGGATACGCTGTGATCTCTATATCATA43876572GTGTAGGGGTTGAATATAGGTCTAATGGATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:6007169-6007190
TTTTGGATACACTGTGATCTCCATATCATA6007169GTGTAGGGGTTGAATATAGGTCTAATGAATTGGCTAAAGAGTTAGATATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:38126613-38126634
TTTTGGATACACTGTGATCTCCACATCATA38126613GTGTAGGGGTTGAATATAGGTCTAATGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:40994213-40994234
TTTTGGATACACTGTGATCTCCACATCATA40994213GTGTAGGGGTTGAATATAGGTCTAAGGAATTGACTAAAGAGTTAGGTATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 9.
OX392564.1:42130966-42130987
TTTTGGATACGATGTGATCTCCATATCATA42130966GTGTAGGGGTTGAATATAGGTCTAATGGATTGCTTAAAGAGTCAGGTATAAA
14-L105672-1033-030-L04-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-030-L04 3', genomic survey sequence.
JY280991.1:737-758
TTTATACCTAACTCTTTAGCCAATTCATTA737GACCTATATTCAACCCCTACACTATGATATGG
61-L106508-1033-026-J12Q-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-026-J12 3', genomic survey sequence.
JY315045.1:413-434
TTTACACCTAACTCTTTAGTCAGTTCATTA413GACCTATATTCAACCCCTACACTATGATGTGAAGATCACAGCGTATCCAAAA
38-L107814-1033-109-L09-ccfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-109-L09 5', genomic survey sequence.
JY331533.1:786-807
TTTATACCTAACTCTTTAGTCAATTCATTA786GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
19-L112383-1033-235-F06-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-235-F06 3', genomic survey sequence.
JY456147.1:619-640
TTTATACCTAACTCTTTAGTCAATTCATTA619GACCTATATTCAACCCCTACACTATGATGTGGAGATCATAGTGTATCCAAAA
24-L113120-1033-272-O06-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-272-O06 3', genomic survey sequence.
JY465110.1:128-149
TTTATACCTAATTCTTTAGTCAATTCATTA128GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
19-L113064-1033-268-E05-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-268-E05 3', genomic survey sequence.
JY470277.1:91-112
TTTATACCTAACTCTTTAGCCAATTCATTA91GACCTATATTCAACCCCTACACTATGATATGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392548.1:28341415-28341436
TTTATACCTAACTCTTTAGTCAATTCATTA28341415GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392548.1:35780176-35780197
TTTATACCTAACTCTTTAGTCAATTCACTA35780176GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:36677612-36677633
TTTATACCTAATTCTTTAGCCAATTCATTA36677612GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:14813329-14813350
TTTATACCTAACTCTTTAGCCAATTCATTA14813329GACCTATATTCAACCCCTACACTATGATATGGAGATCACAGTGTATCCGAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:14818048-14818069
TTTATACCTAACTCTTTAGCCAATTCATTA14818048GACCTATATTCAACCCCTACACTATGATATGGAGATCACAAGGTGTATCCGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:34118872-34118893
TTTATACCTAACTCTTTAGTCAATTCATTA34118872GACCTATATTCAACCCCTACACTATGATATGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:40276263-40276284
TTTATACATAACTCTTTAGTCAATTCATTA40276263GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:39859306-39859327
TTTATACCTAACTCTTTAGCCAATTCATTA39859306GACCTATATTCAACCCCTACACTATGATGTGGAGATCATAGTGTATCCAAGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:24929438-24929459
TTTATACCTAACTCTTTAGTCAATTCATTA24929438GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAAGGTGTATTCAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:39290444-39290465
TTTACACCTAACTCTTTAGTCAGTTCATTA39290444GACCTATATTCAACCCCTACACTATGATGTGAAGATCACAGCGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392557.1:35315644-35315665
TTTATACCTAATTCTTTAGTCAATTCATTA35315644GACCTATATTCAACCCCTACACTATGATATGGAGATCACGTGTATCCGAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392557.1:35320320-35320341
TTTATACCTAATTCTTTAGTCAATTCATTA35320320GACCTATATTCAACCCCTACACTATGATATGGAGATCACAGTGTATCCGAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392559.1:29794898-29794919
TTTATACCTAATTCTTTAGCCAATTCATTA29794898GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:40044359-40044380
TTTATACCTAACTCTTTAGCCAATTCATTA40044359GACCTATATTCAACCCCTACACTATGATGTGGAGATCATAGTGTATCCAAGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:24911897-24911918
TTTATACCTAACTCTTTAGTCAATTCCTTA24911897GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:27367468-27367489
TTTATACCTAACTCGTTAGTCAATTCATTA27367468GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:28104658-28104679
TTTATACCTAACTCTTTAGTCAATTCATTA28104658GACCTATATTCAACCCCTACACTATGATATGGAGATCATAGTGTATCCAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:45926329-45926350
TTTATACTTAACTCTTTAGTCAATTCATTA45926329GACCTATATTCAACCCCTACACTATGATGTGGAGATCACAGTGTATCCAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGTAGGGGTTGAATATAGGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGTAGGGGTTGAATATAGGTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.460 | 0.452 | search_plus_done; http://172.18.8.135:50400/match?q=GTGTAGGGGTTGAATATAGGTC&k=0&no_gap=0&offset=0&limit=50
1.031 | 0.571 | search_minus_done; http://172.18.8.135:50400/match?q=GACCTATATTCAACCCCTACAC&k=0&no_gap=0&offset=0&limit=18
1.046 | 0.015 | cgi_end;

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