GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 12:18:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mdfw2034i14.y1 Mdfw Malus domestica cDNA clone Mdfw2034i14 5' similar to TR:Q9XIF0 Q9XIF0 PUTATIVE DISEASE RESISTANCE PROTEIN, mRNA sequence.
CN582049.1:356-377
GTTTTAGTTACAAGGTCGGACCAAGATGGC356GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTGTGAAACCAAGCATG
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:40175597-40175618
GTTTTAGTTACAAGGTCGGACCAAGATGGC40175597GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTTTCTCTTTGGTGGAA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29649832-29649853
GTTTTAGTTACAAGGTCGGACCAAGATGGC29649832GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTTTCTCTTTGGTGGAA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:29251955-29251976
GTTTTAGTTACAAGGTCGGACCAAGATGGC29251955GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTTTCTCTTTGGTGGAA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25965577-25965598
GTTTTAGTTACAAGGTCGGACCAAGATGGC25965577GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTTTCTCTTTGGTGGAA
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29771158-29771179
GTTTTAGTTACAAGGTCGGACCAAGATGGC29771158GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTTTCTCTTTGGTGGAA
Malus domestica genome assembly, chromosome: 1.
OU744991.1:26244832-26244853
GTTTTAGTTACAAGGTCGGACCAAGATGGC26244832GTGTATATGAAATTCACGCCCTGCGTGATTCCAACTTTTCTCTTTGGTGGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGTATATGAAATTCACGCCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGTATATGAAATTCACGCCCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.157 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=GTGTATATGAAATTCACGCCCT&k=0&no_gap=0&offset=0&limit=50
0.188 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=AGGGCGTGAATTTCATATACAC&k=0&no_gap=0&offset=0&limit=43
0.188 | 0.000 | cgi_end;

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