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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-17 16:15:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Glycine max cultivar Williams 82 chromosome 17.
CP126442.1:6179819-6179838
AGAGAGAGTAAAGACTCTGAAGCTTTGTTT6179819GTGTGTTGTGTTCGGATTCGGAGATCACAATTCACTAGAGACGATGACTC
ss64h03.y1 Gm-c1062 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1062-1230 5' similar to TR:Q9ZPR2 Q9ZPR2 F19B11.9 PROTEIN, mRNA sequence.
BE806746.1:49-68
GAGTCATCGTCTCTAGTGAATTGTGATCTC49CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
sam76e07.y1 Gm-c1069 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1069-5222 5' similar to TR:Q9ZPR2 Q9ZPR2 F19B11.9 PROTEIN, mRNA sequence.
BM955066.1:34-53
GAGTCATCGTCTCTAGTGAATTGTGATCTC34CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
Glycine max cDNA clone: GMFL01-35-D13, 5'end.
BW672794.1:27-46
GATCGTCTCTAGTGAATTGTGATCTC27CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
Glycine max cDNA clone: GMFL01-46-L07, 5'end.
BW680570.1:15-34
GGAATTGTGATCTC15CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
Glycine max cDNA, clone: GMFL02-42-H19, 5'end.
DB970227.1:15-34
GGAATTGTGATCTC15CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
Glycine max cDNA, clone: GMFL02-48-N01, 5'end.
DB972477.1:15-34
GGAATTGTGATCTC15CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
GLLBH58TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
EV267330.1:19-38
GGAGTGAATTGTGATCTC19CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
GLLD358TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG990323.1:53-72
GAGTCATCGTCTCTAGTGAATTGTGATCTC53CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT
Glycine max cDNA, clone: GMFL01-46-L07.
AK287214.1:15-34
GGAATTGTGATCTC15CGAATCCGAACACAACACACAAACAAAGCTTCAGAGTCTTTACTCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTGTGTTGTGTTCGGATTCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGTGTTGTGTTCGGATTCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.168 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=GTGTGTTGTGTTCGGATTCG&k=0&no_gap=0&offset=0&limit=50
0.488 | 0.320 | search_minus_done; http://172.18.8.135:50400/match?q=CGAATCCGAACACAACACAC&k=0&no_gap=0&offset=0&limit=49
0.494 | 0.006 | cgi_end;

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