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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:20:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 2.
OU015356.1:49683295-49683312
TTAGTTTCTAACCATATAGTTAATATGAAA49683295GTGTTAGAGCCAGAAACCCACTGAAGGAAAGACCCCAGGCTCAAATGG
Acomys dimidiatus genome assembly, chromosome: 2.
OU015375.1:50787718-50787735
TTAGTTTCTAACCATATAGTTAATATGAAA50787718GTGTTAGAGCCAGAAACCTGCTGAAGGAAAGACGCCAGACTCAAATGG
Acomys percivali genome assembly, chromosome: 2.
OU015743.1:50880172-50880189
TTAGTTTCTAACCATATAGTTAATATGAAA50880172GTGTTAGAGCCAGAAACCCGCTGAAGGAAAGACCCCCAGACTCAAATG
Sylvilagus floridanus genome assembly, chromosome: 22.
OX463244.1:125334346-125334363
CTGCAAGAAACATAACTGTCTCACGACCAG125334346GTGTTAGAGCCAGAAACCTCTGCCCTTAGCTTTTCCTTATCCTAGCTC
Nesoenas mayeri genome assembly, chromosome: 2.
OY720057.1:88690678-88690695
GTGATTACCAGACAGTACATCAGCTATGCT88690678GTGTTAGAGCCAGAAACCAGTAGCTTTCGCACTTGCTGCCTGTTTCCC
Arctium minus genome assembly, chromosome: 6.
OX941085.1:45199338-45199355
ATGACCACTTTAATGGAGAGATACTAAACA45199338GTGTTAGAGCCAGAAACCCAATGTGTTATGAATTGAAAGTCACAAGAA
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:79411422-79411439
CATAAGATTTAATATGTGGCCTATAAGGAA79411422GGTTTCTGGCTCTAACACAGTTGTTTTTGTAGATGCATGGACAGTATA
Streptopelia turtur genome assembly, chromosome: 2.
LR594552.1:77206523-77206540
GGGAAACAGGCAGCAAGTGCAAAAGCTACT77206523GGTTTCTGGCTCTAACACAGCATAGCTGATTTACTGTCTGGTAATCAC
Sequence 69987 from Patent EP2761003.
JC684206.1:6-23
GTATC6GGTTTCTGGCTCTAACACGCCCAAGGACAGGTCTATTTTTTTTCTCTT
PP_YEb0034G04 Peach developing fruit mesocarp Stage S4 Prunus persica cDNA clone PP_YEb0034G04, mRNA sequence.
DT455253.1:368-385
GCCTGAACCGGGCTCCGCCGCTCCTGTATC368GGTTTCTGGCTCTAACACGCCCAAGGACAGCGCTAAACCTAAAGCTAA
Pm_0604 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869178.1:611-628
GCCCGAACCCGGCTCCGCCGCTCCTGTATC611GGTTTCTGGCTCTAACACGCCCAAGGACAGCGCTAAACCTAAAGCTAA
Fusarium fujikuroi strain Augusto2 chromosome III.
CP023091.1:2499916-2499933
AAAGGCTGCGTTTGAGCTTCGAATCTTAAG2499916GGTTTCTGGCTCTAACACGACAATTCCAGCCATGTGAGGGAACGTCGA
Prunus mume strain gojrou clone P09 SSR marker genomic sequence.
GU458010.1:214-231
ATTATTTTTTACGTTTGAAAATTTAAACAG214GGTTTCTGGCTCTAACAC
Prunus mume strain taihu 3 clone P10 SSR marker genomic sequence.
GU458011.1:250-267
GCCCGAACCCGGCTCCGCCGCTCCTGTATC250GGTTTCTGGCTCTAACAC
Prunus americana strain kuhehonglian clone A29 SSR marker genomic sequence.
GU458030.1:249-266
GCCCGAACCCGGCTCCGCCGCTCCTGTATC249GGTTTCTGGCTCTAACAC
Prunus americana strain fangshanxiangbai clone A30 SSR marker genomic sequence.
GU458031.1:249-266
GCCCGAACCCGGCTCCGCCGCTCCTGTATC249GGTTTCTGGCTCTAACAC
Sutcliffiella horikoshii strain 20a chromosome, complete genome.
CP020880.1:1525486-1525503
AATGAAGAATCTAGATTGGATTTGTCCAAA1525486GGTTTCTGGCTCTAACACAAGTTTCTCCATACTGGAGCGTAAAACAAT
Patella pellucida genome assembly, chromosome: 1.
OU795036.1:53463025-53463042
AATATGAATACCGGTACACAAGAGTTGCCA53463025GGTTTCTGGCTCTAACACAAGTACAGTCAATGTTATTATTAGAATATT
Aplidium turbinatum genome assembly, chromosome: 11.
OU964928.1:16874914-16874931
TTGTTGTTTTATTTGCCTTCTTTCACATTT16874914GGTTTCTGGCTCTAACACTAAAAAAGCATGATGAACAATATTCTTAAT
Epistrophella euchroma genome assembly, chromosome: 1.
OX346245.1:2690562-2690579
GCTTTCAATTTTAAATGGTCTCAGGAGATG2690562GGTTTCTGGCTCTAACACTTCGTTTAAGCTCGTCTCACACATGCTCGA
Cydia amplana genome assembly, chromosome: 22.
OX419676.1:1678864-1678881
GATAGGTGCGAACATTTAGATATGCTAAAA1678864GGTTTCTGGCTCTAACACTGCATAGATTCAAATTTCACTGACAAATTT
Tromatobia lineatoria genome assembly, chromosome: 14.
OX453047.1:5878317-5878334
AGCGATCTTTCTTTTTCCCTGTAAAAGCAC5878317GGTTTCTGGCTCTAACACTCCAAAGCAATGTTTTTTTCAATGTATTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGTTAGAGCCAGAAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGTTAGAGCCAGAAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.301 | 0.292 | search_plus_done; http://172.18.8.135:50400/match?q=GTGTTAGAGCCAGAAACC&k=0&no_gap=0&offset=0&limit=50
0.608 | 0.307 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTTCTGGCTCTAACAC&k=0&no_gap=0&offset=0&limit=44
0.619 | 0.011 | cgi_end;

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