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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:04:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a005M02_T7.
AM389064.1:170-189
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA170GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a008C11_T7.
AM389565.1:329-348
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA329GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a011H05_T7.
AM390259.1:531-550
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA531GTGTTGCAGTTGGTCTTCCGGTTAGTTCCTCATGGGATACTCTATCTCTC
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a014N23_T7.
AM390988.1:75-94
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA75GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
Lotus japonicus cDNA clone:MWL052a02_r, 5' end.
AV409098.1:151-170
GAGCTGGTGTTAACAAAATCTCCCTTCTAA151GTGTTGCAGTTGGTCTTCCGAATGTTGGTCCACATTTTGAAACATGGAAT
Lotus japonicus cDNA clone:MWL054c01_r, 5' end.
AV409231.1:65-84
GAGCTGGTGTTAACAAAATCTCCCTTCTAA65GTGTTGCAGTTGGTCTTCCGAATGTTGGTCCACATTTTGAAACATGGAAT
Lotus japonicus cDNA clone:MWM075d09_r, 5' end.
AV427040.1:82-101
GAGCTGGTGTTAACAAAATCTCCCTTCTAA82GTGTTGCAGTTGGTCTTCCGAATGTTGGTCCACATTTTGAAACATGGAAT
BNARO1GH_T3_008_E06_22NOV2006_040 Brassica napus BNARO1GH Brassica napus cDNA 5', mRNA sequence.
ES900231.1:758-777
ACGCAGGTGTCAACAAGCTTGCTCTGCTGA758GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
BNARO5GH_T3_015_F08_30NOV2006_054 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence.
ES906612.1:764-783
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA764GTGTTGCAGTTGGTCTTCCGAACGTCGGTCAACA
0139516 Brassica napus Root - drought Brassica napus cDNA, mRNA sequence.
EV222918.1:563-582
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA563GTGTTGCAGTTGGTCTTCCGAACGTCGGTCAACACTTTGAGACGTGGAAC
RR1A682TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV524958.1:363-382
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA363GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
BR082898 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-032E06 5', mRNA sequence.
EX096608.1:608-627
ACGCAGGTGTCAACAAGCTTGCTCTGCTGA608GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACATGGAAC
BR101393 cotyledon cDNA library KHCT Brassica rapa subsp. pekinensis cDNA clone KHCT-04C08 5', mRNA sequence.
EX117563.1:381-400
ACGCAGGTGTCAACAAGCTTGCTCTGCTGA381GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACATGGAAC
BR112577 ovule and silique cDNA library KHOS Brassica rapa subsp. pekinensis cDNA clone KHOS-11B02 3', mRNA sequence.
EX128747.1:480-499
ACGCAGGTGTCAACAAGCTTGCTCTGCTGA480GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACATGGAAC
RR4D501TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EY921509.1:324-343
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA324GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
RR4DC10TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EY922138.1:324-343
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA324GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
Raphanus sativus mRNA, clone: RSCF03J11, 5' end sequence.
FY428722.1:275-294
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA275GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
Raphanus sativus mRNA, clone: RSCS08I09, 5' end sequence.
FY448780.1:474-493
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA474GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
Raphanus sativus mRNA, clone: RSCS11D04, 5' end sequence.
FY449729.1:570-589
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA570GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
0248213 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO919028.1:359-378
ACGCAGGTGTCAACAAGCTTGCTCTGCTGA359GTGTTGCAGTTGGTCTTCCGGTTAGTTCCTCATGGGATACTCTATCTCTC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_6945.
FX738684.1:617-636
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA617GTGTTGCAGTTGGTCTTCCGAATGTTGGTCAACACTTTGAGACGTGGAAT
BOMMC96TR BO_2_3_KB Brassica oleracea genomic clone BOMMC96, genomic survey sequence.
BH694596.1:24-43
GTGTCACAAGCTTGCTCTGTTGT24GTGTTGCAGTTGGTCTTCCGGTTAGTTCCTCATGGGATACTCTATCTCTC
BOT01-77L24TF BOT01 Brassica oleracea genomic clone BOT01-77L24, genomic survey sequence.
FI730642.1:5-24
TTGA5GTGTTGCAGTTGGTCTTCCGGTTAGTTCCCCATGGGATACTCTATCTCTC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB027E01, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC232472.1:39039-39058
ACGCAGGTGTCAACAAGCTTGCTCTGCTGA39039GTGTTGCAGTTGGTCTTCCGGTTAGTTCCTCATGGGATAATCTATCGCTC
Lotus japonicus genomic DNA, chromosome 3, clone: LjB19K14, BM1881.
AP010438.1:47293-47312
GAGCTGGTGTTAACAAAATCTCCCTTCTAA47293GTGTTGCAGTTGGTCTTCCGGTTTGTTCTCTCTCTCTCTCTCTCTCTCTC
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:71908596-71908615
ATGCAGGTGTCAACAAGCTTGCTCTGTTGA71908596GTGTTGCAGTTGGTCTTCCGGTTAGTTCCTCATGGGATACTCTATCTCTC
Raphanus sativus genome assembly, chromosome: 3.
OY743209.1:29638782-29638801
ACGCAGGTGTCAACAAGCTTGCTCTGTTGA29638782GTGTTGCAGTTGGTCTTCCGGTTAGTTCCTCATGGGATACTCTCTAGCTC
Geranium rotundifolium genome assembly, chromosome: 12.
OY987322.1:21049769-21049788
GAGTGGGCATTAACAAAATTTCCTTGTTAA21049769GTGTTGCAGTTGGTCTTCCGGTTGGTTCTTCCGTTCTTCTGACTTAATGG
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a007A02_SP6.
AM385923.1:282-301
ATTCCACGTCTCAAAGTGTTGACCAACATT282CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCAT
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a007A04_SP6.
AM385924.1:282-301
ATTCCACGTCTCAAAGTGTTGACCAACATT282CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCAT
BNARO1GH_T3_030_C01_23NOV2006_011 Brassica napus BNARO1GH Brassica napus cDNA 5', mRNA sequence.
ES902488.1:754-773
ATTCCACGTCTCAAAGTGTTGACCAACATT754CGGAAGACCAACTGCAACACTCAGCAGAGCAAGC
0190477 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV216414.1:678-697
GTTCCACGTCTCAAAGTGTTGACCGACGTT678CGGAAGACCAACTGCAACACTCAACAG
Raphanus sativus mRNA, clone: RSCF08O17, 5' end sequence.
FY430096.1:739-758
ATTCCACGTCTCAAAGTGTTGACCAACATT739CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Raphanus sativus mRNA, clone: RSCR18C24, 5' end sequence.
FY445317.1:701-720
ATTCCACGTCTCAAAGTGTTGACCAACATT701CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Raphanus sativus mRNA, clone: RSCS05G13, 5' end sequence.
FY447700.1:736-755
ATTCCACGTCTCAAAGTGTTGACCAACATT736CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
TSA: Raphanus sativus var. sativus RNA, contig: WG3_4725.
FX657924.1:818-837
ATTCCACGTCTCAAAGTGTTGACCAACATT818CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_10244.
FX699986.1:755-774
GTTCCATGTCTCAAAGTGTTGACCAACATT755CGGAAGACCAACTGCAACACTCAGCAGAGCAAGCTTGTTGACACCTGCGT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_3074.
FX736298.1:453-472
ATTCCACGTCTCAAAGTGTTGACCAACATT453CGGAAGACCAACTGCAACACTCAGCAGAGCAAGCTTGTTGACACCTGCGT
TSA: Raphanus sativus RS26687 mRNA sequence.
JT811234.1:727-746
ATTCCACGTCTCAAAGTGTTGACCAACATT727CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:83517203-83517222
GAGAGAGAGAGAGAGAGAGAGAGAACAAAC83517203CGGAAGACCAACTGCAACACTTAGAAGGGAGATTTTGTTAACACCAGCTC
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:5430950-5430969
GAGCGATAGATTATCCCATGAGGAACTAAC5430950CGGAAGACCAACTGCAACACTCAGCAGAGCAAGCTTGTTGACACCTGCGT
Brassica napus genome assembly, chromosome: A03.
HG994357.1:5417225-5417244
GAGAGATAGAGTATCCCATGAGGAACTAAC5417225CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Brassica napus genome assembly, chromosome: C03.
HG994367.1:7330540-7330559
GAGAGATAGAGTATCCCATGAGGAACTAAC7330540CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCAT
Brassica rapa genome, scaffold: A03.
LR031572.1:5341035-5341054
GAGAGATAGAGTATCCCATGAGGAACTAAC5341035CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:7310941-7310960
GAGAGATAGAGTATCCCATGAGGAACTAAC7310941CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCAT
Raphanus sativus genome assembly, chromosome: 6.
LR778315.1:5883500-5883519
GAGCTAGAGAGTATCCCATGAGGAACTAAC5883500CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:5342589-5342608
GAGAGATAGAGTATCCCATGAGGAACTAAC5342589CGGAAGACCAACTGCAACACTCAACAGAGCAAGCTTGTTGACACCTGCGT
Triglochin maritima genome assembly, chromosome: 7.
OY821776.1:9122663-9122682
ATGTAAAGTGAAGTGATAAGCGGTACTAAC9122663CGGAAGACCAACTGCAACACTTAAAATGGAAATCCTATTACTACCAGCCC
Triglochin maritima genome assembly, chromosome: 8.
OY821777.1:8613786-8613805
ATGTAAAGTGAAGTGATAAGCGATACTAAC8613786CGGAAGACCAACTGCAACACTTAAAATGGAAATCCTATTACTACCAGCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTGTTGCAGTTGGTCTTCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTGTTGCAGTTGGTCTTCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.201 | 1.192 | search_plus_done; http://172.18.8.135:50400/match?q=GTGTTGCAGTTGGTCTTCCG&k=0&no_gap=0&offset=0&limit=50
1.674 | 0.473 | search_minus_done; http://172.18.8.135:50400/match?q=CGGAAGACCAACTGCAACAC&k=0&no_gap=0&offset=0&limit=22
1.688 | 0.014 | cgi_end;

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