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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:02:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Cannabis sativa PK05336.1_1.CasaPuKu mRNA sequence.
JP449485.1:833-852
GGAAGAGCATTTCGCTGCCTTTTGCGATTG833GTTAGCAGAGAAGAAAGCCGAACGCCGTTCCAATACTACTACTAATAGTA
Vibrio fischeri ES114 chromosome I, complete sequence.
CP000020.2:1108090-1108109
ATTACCGAAAAACTTTGCTTTTTGAACAGA1108090GTTAGCAGAGAAGAAAGCCGCATTATCTGAGCCTTTGCGCATGGTGAGAG
Vibrio campbellii strain DS40M4 chromosome 2, complete sequence.
CP030789.1:1851588-1851607
GTTCGCAAACACTTTTGGTTTTTGAACAGA1851588GTTAGCAGAGAAGAAAGCCGCGTTGTCAGAACCTTTACGCATGGTTAAAG
Prochlorococcus sp. MIT 0801, complete genome.
CP007754.1:1667026-1667045
TCTTATCCGCTAACGCTTTCTTCTCTGCTG1667026CGGCTTTCTTCTCTGCTAACGCTTTCTTCTCTGCTAAAGCTTTCTTATCT
Vibrio campbellii strain LJC011 chromosome 2, complete sequence.
CP050479.1:1779100-1779119
CTTTAACCATGCGTAAAGGTTCTGACAACG1779100CGGCTTTCTTCTCTGCTAACTCTGTTCAAAAACCAAAAGTGTTTGCGAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTAGCAGAGAAGAAAGCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTAGCAGAGAAGAAAGCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.294 | 0.285 | search_plus_done; http://172.18.8.135:50400/match?q=GTTAGCAGAGAAGAAAGCCG&k=0&no_gap=0&offset=0&limit=50
0.381 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=CGGCTTTCTTCTCTGCTAAC&k=0&no_gap=0&offset=0&limit=47
0.383 | 0.002 | cgi_end;

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