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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:41:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 2.
LR884461.1:26847493-26847512
TCATGAGGACGGCCCTGCATGCAAGACAAT26847493GTTCCACCTTCAAAGATGCAGGTAGTCTTTGTGAATTAATTGTTCATGGT
Coriaria nepalensis isolate Cnep1 chromosome 04.
CP114464.1:12032681-12032700
GACGGGCCCCAGTCGAGTTTGCTGTCTGAA12032681GTTCCACCTTCAAAGATGCACCATATTCCTCTCTGGTCTTGTTTCTCTGC
Coriaria nepalensis isolate Cnep1 chromosome 04.
CP114464.1:12035058-12035077
CGACGGGCCCAGTCGAGTTTGCTGTCTGAA12035058GTTCCACCTTCAAAGATGCACCATGTTCCTCTCTGGTCTTGTTTCTCTGC
Ziziphus jujuba cultivar Dongzao chromosome 5.
CP134455.1:2792064-2792083
GAGGGTCCCCAGTCAAGCTTTCCATCTGGG2792064GTTCCACCTTCAAAGATGCACCATATTCCTCTCCCGTCCTTCTTCTCAGC
Solanum dulcamara genome assembly, chromosome: 9.
OX359260.1:4010366-4010385
TTCGGGCCCCAATCAAGACGGTCATCAGAC4010366GTTCCACCTTCAAAGATGCAGTATATTCCCCTGCTATCTTTTTGATCAGC
Vicia faba genome assembly, chromosome: 3.
OX451738.1:1540068507-1540068526
GATGGACCCCAATCAAGCTTTGAATCTTGA1540068507GTTCCACCTTCAAAGATGCAATAAATTCCTCTATCATCTTTTCTCTCTGC
Quercus cerris genome assembly, chromosome: 1.
OY770006.1:92082698-92082717
GATGGTCCCCAATCAAGACGTCCTTCTGGA92082698GTTCCACCTTCAAAGATGCACCATATCCCTCTCCCATCTTGCTGAGTTGC
Quercus cerris genome assembly, chromosome: 1.
OY770006.1:92112320-92112339
GATGGTCCCCAATCAAGACGTCCGTCTGGA92112320GTTCCACCTTCAAAGATGCACCATATTCCTCTCCCATCTTGCTTCTCAGC
Lathyrus aphaca genome assembly, chromosome: 2.
OZ014520.1:627652916-627652935
GATGGACCCCAATCAAGCTTTGAATCCGGA627652916GTTCCACCTTCAAAGATGCAATAGATTCCTCTATCATCTTTTCTCTCTGC
Euphorbia tirucalli mRNA, clone: ETC079B08, 5' end.
BP959759.1:411-430
GCTGAGAAGAAAGACGAAAGAGGCATATGG411TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Euphorbia tirucalli mRNA, clone: ETC115E10, 5' end.
BP959760.1:382-401
GCTGAGAAGAAAGACGAAAGAGGCATATGG382TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Euphorbia tirucalli mRNA, clone: ETC073G09, 5' end.
BP959761.1:382-401
GCTGAGAAGAAAGACGAAAGAGGCATATGG382TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Euphorbia tirucalli mRNA, clone: ETC023A03, 5' end.
BP959763.1:385-404
GCTGAGAAGAAAGACGAAAGAGGCATATGG385TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Euphorbia tirucalli mRNA, clone: ETC110D01, 5' end.
BP959764.1:376-395
GCTGAGAAGAAAGACGAAAGAGGCATATGG376TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Euphorbia tirucalli mRNA, clone: ETC053A06, 5' end.
BP959765.1:372-391
GCTGAGAAGAAAGACGAAAGAGGCATATGG372TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Euphorbia tirucalli mRNA, clone: ETC093F03, 5' end.
BP959766.1:191-210
GCTGAGAAGAAAGACGAAAGAGGCATATGG191TGCATCTTTGAAGGTGGAACCGAGGATGATCGCCTTGATTGGGGGCCGTC
Ost1T_465 Oak tissue culture growing 1 hour in hypertonic medium Quercus robur cDNA 5', 3', mRNA sequence.
DN950032.1:402-421
GCTGAGAAGCAAGATGGAAGAGGAATATGG402TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
CMSMEa0004A04f CMSMEa Castanea mollissima cDNA, mRNA sequence.
GO923383.1:399-418
GCTGAGAAGCAAGATGGGAGAGGAATATGG399TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
TSA: Nothofagus nervosa isotig01062 mRNA sequence.
JT782621.1:326-345
GCTGAGAAGCAAGATGGGAGAGGAATTTGG326TGCATCTTTGAAGGTGGAACTCCAGATGACCGTCTTGACTGGGGACCGTC
Carpinus viminea chromosome 8.
CP054674.1:1506126-1506145
GCTGAGAGAAAAGATGATAGAGGAATTTGG1506126TGCATCTTTGAAGGTGGAACTTCGGATGGACGTCTCAACTGGGGGCCCCA
Coriaria nepalensis isolate Cnep1 chromosome 07.
CP114467.1:9904874-9904893
GCAGAGAGAAAAGACGGGAGAGGAATATGG9904874TGCATCTTTGAAGGTGGAACTCCAGACAACCGCCTCGACTGGGGCCCGTC
Coriaria nepalensis isolate Cnep1 chromosome 07.
CP114487.1:9954303-9954322
GCAGAGAGAAAAGACGGGAGAGGAATATGG9954303TGCATCTTTGAAGGTGGAACTCCAGACAACCGCCTCGACTGGGGCCCGTC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:5715013-5715032
GCTGAGAAGCAAGATGGAAGAGGAATATGG5715013TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:5721618-5721637
GCTGAGAAGCAAGATGGGAGAGGAATATGG5721618TGCATCTTTGAAGGTGGAACTCCAGATGGACGTCTTGATTGGGGACCATC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:5731944-5731963
GCTGAGAAGCAAGATGAGAGAGGAATATGG5731944TGCATCTTTGAAGGTGGAACTCCAGATGGACGTCTTGATTGGGGGCCATC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:6410893-6410912
GCTGAGAAGCAAGATGGAAGAGGAATATGG6410893TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:6417427-6417446
GCTGAGAAGCAAGATGGGAGAGGAATATGG6417427TGCATCTTTGAAGGTGGAACTCCAGATGGATTGGGGACCATCCTTCATTG
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:6427762-6427781
GCTGAGAAGCAAGATGAGAGAGGAATATGG6427762TGCATCTTTGAAGGTGGAACTCCAGATGGACGTCTTGATTGGGGTCCATC
Quercus variabilis isolate HB chromosome 2b.
CP129434.1:4689654-4689673
GCTGAGAAACAAGATGGGAGAGGAATATGG4689654TGCATCTTTGAAGGTGGAACTCCAGATAGACGTCTTGATTGGGGACCATC
Quercus variabilis isolate HB chromosome 2b.
CP129434.1:4710822-4710841
GCTGAGAAGCAAGATGGGAGAGGAAAATGG4710822TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
Quercus variabilis isolate HB chromosome 2b.
CP129434.1:4769805-4769824
GCTGAGAAGCAAGATGGGAGAGGAATATGG4769805TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
Quercus variabilis isolate HB chromosome 2b.
CP129434.1:4800150-4800169
CCCTAGAAGCAAGATGGGAGAGGGATATGG4800150TGCATCTTTGAAGGTGGAACTCCAGAAGCACGTCTTGATTGGGGACCATC
Quercus variabilis isolate HB chromosome 2a.
CP129446.1:5072396-5072415
GCTGAGAAGCAAGATGGGAGAGGAATATGG5072396TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTGGGGACCATC
Antiaris toxicaria isolate JCLG002 chromosome 8.
CP141160.1:22975509-22975528
GCTGAGAAGCGCGACGAGAGAGGAATACTA22975509TGCATCTTTGAAGGTGGAACCCCAGATTCACGTCTTGACTGGGGACCTTC
Antiaris toxicaria isolate JCLG002 chromosome 8.
CP141173.1:22762683-22762702
GCTGAGAAGCGCGACAAGAGAGGAATACTA22762683TGCATCTTTGAAGGTGGAACCCCAAATTCACGTCTTGACTGGGGACCTTC
Manihot esculenta alpha-amylase gene, partial cds.
DQ017830.1:429-448
GCTGAGAAGAAAGATGATAGAGGAATATAT429TGCATCTTTGAAGGTGGAACTCCTGATGGTACCCTCGACTGGGGTCCTTC
Fagus sylvatica genome assembly, chromosome: 4.
OU015764.1:31315471-31315490
GCTGAGAAGCAAGATGGTAGAGGCATATGG31315471TGCATCTTTGAAGGTGGAACACCAGATGGACGTCTTGATTGGGGACCATC
Quercus robur genome assembly, chromosome: 2.
OW028766.1:5059829-5059848
GCTGAGAAGCAAGATGGAAGAGGAATATGG5059829TGCATCTTTGAAGGTGGAACTCCAGATGGACGTCTTGATTGGGGACCATC
Quercus robur genome assembly, chromosome: 2.
OW028766.1:5077771-5077790
GCTGAGAAGCAAGATGGGAGAGGAATATGG5077771TGCATCTTTGAAGGTGGAACTCCAGATGGACGTCTTGATTGGGGACCATC
Quercus robur genome assembly, chromosome: 2.
OW028766.1:5091655-5091674
GCTGAGAAGCAGGATGAGAGAGGAATATGG5091655TGCATCTTTGAAGGTGGAACTCCAGATGGACGTCTTGATTGGGGTCCATC
Quercus robur genome assembly, chromosome: 2.
OW028766.1:5111685-5111704
GCTGAGAAGCAAGATGGGAGAGGAATATGG5111685TGCATCTTTGAAGGTGGAACTCCAGACGGACGTCTTGATTAGGGACCATC
Quercus robur genome assembly, chromosome: 2.
OW028766.1:5142859-5142878
GCTGAGAAGCAAGATGGGAGAGGAATATGG5142859TGCATCTTTGAAGGTGGAACTCCGGACGGACGTCTTGATTGGGGACCATC
Luzula sylvatica genome assembly, chromosome: 6.
OX326961.1:29011411-29011430
GCCGACTATAAAGATAGCCGAGGCATTTAT29011411TGCATCTTTGAAGGTGGAACCCCGGATGATCGCCTTGATTGGGGCCCGGG
Luzula sylvatica genome assembly, chromosome: 6.
OX326961.1:29033484-29033503
GCCGACTATAAAGATAGCCGAGGCATTTAT29033484TGCATCTTTGAAGGTGGAACCCCGGATGGTCGCCTTGATTGGGGCCCGGG
Vicia faba genome assembly, chromosome: 3.
OX451738.1:1540019423-1540019442
GCAGAGAGAAAAGATGATAGAGGAATTTAT1540019423TGCATCTTTGAAGGTGGAACTCAAGATTCAAAGCTTGATTGGGGTCCATC
Euphorbia lathyris genome assembly, chromosome: 7.
OY755226.1:50256474-50256493
GCAGAGAAGCAAGATGAAAGAGGCATATGG50256474TGCATCTTTGAAGGTGGAACTTCCGATAATCGCCTTGATTGGGGACCATC
Myrica gale genome assembly, chromosome: 4.
OZ005601.1:24153581-24153600
GCTGAGAAGCAAGATGGGAGAGGAATTTGG24153581TGCATCTTTGAAGGTGGAACTCCAGATGCGCGTCTTGACTGGGGGCCGTC
Lathyrus aphaca genome assembly, chromosome: 2.
OZ014520.1:627630053-627630072
GCAGAGAGAAAAGATGATAGAGGAATCTAT627630053TGCATCTTTGAAGGTGGAACTCAGGATTCAAAGCTTGATTGGGGTCCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTCCACCTTCAAAGATGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTCCACCTTCAAAGATGCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.172 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=GTTCCACCTTCAAAGATGCA&k=0&no_gap=0&offset=0&limit=50
0.868 | 0.696 | search_minus_done; http://172.18.8.135:50400/match?q=TGCATCTTTGAAGGTGGAAC&k=0&no_gap=0&offset=0&limit=41
0.893 | 0.025 | cgi_end;

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