GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:31:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mdlv4-4042b13.y1 Mdlv4 Malus domestica cDNA clone Mdlv4-4042b13 5' similar to TR:Q9SFX0 Q9SFX0 HYPOTHETICAL 42.3 KD PROTEIN, mRNA sequence.
CV826127.1:48-67
ATCAAGGCAGCTACAAACAAGTTTAAGGAG48GTTCTAGGCCGGGGTAGTTTCGGTTGTGTTTACCTTGGAAAGCTTTCGGA
Arvicola amphibius genome assembly, chromosome: 7.
LR862386.1:136491735-136491754
AAGGGAGAGATGGAGAACCGACCAACCCTG136491735AAACTACCCCGGCCTAGAACTAGGATTATGCATTGGCAAACCTCAATATT
TSA: Pyrus x bretschneideri Unigene58093_XinShao mRNA sequence.
JR646891.1:691-710
TCCGAAAGCTTTCCAAGGTAAACACAACCG691AAACTACCCCGGCCTAGAACCTCCTTAAAATTGTTTGTAGCTGCCTTGAT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:27299474-27299493
TCCGAAAGCTTTCCAAGGTAAACACAACCG27299474AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:28437510-28437529
TCCGAAAGCTTTCCAAGGTAAACACAACCG28437510AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:26292603-26292622
TCCGAAAGCTTTCCAAGGTAAACACAACCG26292603AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:26843716-26843735
TCCGAAAGCTTTCCAAGGTAAACACAACCG26843716AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:28083444-28083463
TCCGAAAGCTTTCCAAGGTAAACACAACCG28083444AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:25853833-25853852
TCCGAAAGCTTTCCAAGGTAAACACAACCG25853833AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:27992544-27992563
TCCGAAAGCTTTCCAAGGTAAACACAACCG27992544AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus domestica genome assembly, chromosome: 10.
OU696686.1:27850457-27850476
TCCGAAAGCTTTCCAAGGTAAACACAACCG27850457AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus domestica genome assembly, chromosome: 10.
OU744551.1:27946505-27946524
TCCGAAAGCTTTCCAAGGTAAACACAACCG27946505AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus domestica genome assembly, chromosome: 10.
OU744962.1:28677469-28677488
TCCGAAAGCTTTCCAAGGTAAACACAACCG28677469AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus domestica genome assembly, chromosome: 10.
OU745000.1:27767448-27767467
TCCGAAAGCTTTCCAAGGTAAACACAACCG27767448AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:26317793-26317812
TCCGAAAGCTTTCCAAGGTAAACACAACCG26317793AAACTACCCCGGCCTAGAACCTCCTTAAACTTGTTTGTAGCTGCCTTGAT
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:26704381-26704400
TCCGAAAGCTTTCCAAGGTAAACACAACCG26704381AAACTACCCCGGCCTAGAACCTCCTTAAAATTGTTTGTAGCTGCCTTGAT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:18705137-18705156
TCCGAAAGCTTTCCAAGGTAAACACAACCG18705137AAACTACCCCGGCCTAGAACCTCCTTAAAATTGTTTGTAGCTGCCTTGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTCTAGGCCGGGGTAGTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTCTAGGCCGGGGTAGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.134 | 0.125 | search_plus_done; http://172.18.8.135:50400/match?q=GTTCTAGGCCGGGGTAGTTT&k=0&no_gap=0&offset=0&limit=50
0.169 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=AAACTACCCCGGCCTAGAAC&k=0&no_gap=0&offset=0&limit=49
0.179 | 0.011 | cgi_end;

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