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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:59:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus molossinus genome assembly, chromosome: 1.
OW971658.1:28726292-28726311
AACTACCATCTTTGTGTTTCTGCCAGAGAA28726292GTTGCAGAAGAGAAAAATGGTGCTGGATCACTAAAGAGAGAGGTAGGGCA
Mus musculus musculus genome assembly, chromosome: 1.
OW971762.1:28328036-28328055
AACTACCATCTTTGTGTTTCTGCCAGAGAA28328036GTTGCAGAAGAGAAAAATGGTGCTGGATCACTAAAGAGAGAGGTAGGGCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:1530084-1530103
TCCTTTATCTTGTTTCTCCAGCAAAACCCT1530084GTTGCAGAAGAGAAAAATGGAGGAAGAGAAAGAGAGAGGTTGGAAGTTTT
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:1839977-1839996
TCTTTTATCTTGTTCCTCCAGCAAAACCCT1839977GTTGCAGAAGAGAAAAATGGAGGAAGAGAAAGAGAGAGGTTGGAAGTTTT
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:1490980-1490999
TCCTTTATCTTGTTTCTCCAGCAAAACCCT1490980GTTGCAGAAGAGAAAAATGGAGGAAGAGAAAGAGAGAGGTTGGAAGTTTT
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:1777402-1777421
TCTTTTATCTTGTTCCTCCAGCAAAACCCT1777402GTTGCAGAAGAGAAAAATGGAGGAAGAGAAAGAGAGAGGTTGGAAGTTTT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:1676502-1676521
TCTTTTATCTTGTTTCTCCAGCAAAACCTT1676502GTTGCAGAAGAGAAAAATGGAGGGAGCGAGGGAGAGAGAGAGAGAGAGAG
Nasturtium officinale genome assembly, chromosome: 3.
OY978501.1:11781099-11781118
TGCAACGGTCAGAAGCAGAAGAAGACAAAA11781099GTTGCAGAAGAGAAAAATGGGAGAGGTACTGTACGGAGTTCTCTGTGAAC
Erodium maritimum genome assembly, chromosome: 9.
OY997596.1:7957245-7957264
TTCTTTGCTGAGATTGAGCTGATCAAAGTA7957245GTTGCAGAAGAGAAAAATGGGAGAGCAGCATGAAAGAGTTCTGAAGGAGA
Biston betularia genome assembly, chromosome: 6.
FR989868.1:15405864-15405883
CATGACTCCTGTTTGAAAGAATAGTCTTAA15405864GTTGCAGAAGAGAAAAATGGAAGGAGGAAAGGAAAACATTTGCCCTGCAG
Gibbula magus genome assembly, chromosome: 2.
OW388290.1:18589533-18589552
GAAACTGATGAAAACGGGTATTTGGTAGGG18589533GTTGCAGAAGAGAAAAATGGAACGGAAAAAAAATGGATATAAAACTTGTA
Taphrorychus bicolor genome assembly, chromosome: 2.
OX638298.1:28130360-28130379
AATTTGCTGTAATGCATTCTGTTAATCCCT28130360GTTGCAGAAGAGAAAAATGGAACAATTGAAGTAAAAAGATGGAATTTTGG
Heterocephalus glaber genome assembly, chromosome: 15.
OX090923.1:16615335-16615354
GACTTTAGGAATTAGTACTCATCCCAAGCC16615335CCATTTTTCTCTTCTGCAACATGGAGTAATAACATGCAAATGCACCCGCA
Heterocephalus glaber genome assembly, chromosome: 15.
OX090955.1:2096578-2096597
GACTTTAGGAATTAGTACTCATCCCAAGCC2096578CCATTTTTCTCTTCTGCAACATGGAGTAATAACATGCAAATGCACCCGCA
Heterocephalus glaber genome assembly, chromosome: 9.
OZ001074.1:16618335-16618354
GACTTTAGGAATTAGTACTCATCCCAAGCC16618335CCATTTTTCTCTTCTGCAACATGGAGTAATAACATGCAAATGCACCCGCA
Heterocephalus glaber genome assembly, chromosome: 9.
OZ001117.1:16558578-16558597
GACTTTAGGAATTAGTACTCATCCCAAGCC16558578CCATTTTTCTCTTCTGCAACATGGAGTAATAACATGCAAATGCACCCGCA
Balaenoptera acutorostrata genome assembly, chromosome: 12.
OX465362.1:35454045-35454064
TATTCCTGTAAACGTCCAACAAAACAAATG35454045CCATTTTTCTCTTCTGCAACTTTTTAATCTATATGATTGGGAAAGTGTCA
Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 6.
OU383779.1:30193699-30193718
TTTTCCCTGCAGGACCCCATTCTTTTGTGC30193699CCATTTTTCTCTTCTGCAACAACTTCATGTCAGATTTGGGTGAAGCACAA
Acipenser ruthenus genome assembly, chromosome: 2.
OV737683.1:72421223-72421242
CAACATTTGGTGAGCATGAAGAAAAGTGTT72421223CCATTTTTCTCTTCTGCAACTGTAGAAATATTCTACAATTCCTGTCATGC
Acipenser ruthenus genome assembly, chromosome: 2.
OV754671.1:72391337-72391356
CAACATTTGGTGAGCATGAAGAAAAGTGTT72391337CCATTTTTCTCTTCTGCAACTGTAGAAATATTCTACAATTCCTGTCATGC
Blennius ocellaris genome assembly, chromosome: 4.
OY730204.1:11595918-11595937
GTGGCCATCGGGTCATTTAACCCTGTTCTA11595918CCATTTTTCTCTTCTGCAACAATATTCTACCTATTTTATGTTTGTTCAAA
Chelon labrosus genome assembly, chromosome: 5.
OY741293.1:19592247-19592266
GCTCAATTAGACGTCCATGTTGGTGGGAAT19592247CCATTTTTCTCTTCTGCAACTGATGCATTTAATGGACTACTTGTGCAGGA
021121ABMA002082HT (ABMA) M9 phloem Malus domestica cDNA clone ABMA002082, mRNA sequence.
CN911491.1:173-192
AAAACTTCCAACCTCTCTCTTTCTCTTCCT173CCATTTTTCTCTTCTGCAACAGGGTTTTGCTGGAGGAACAAGATAAAAGA
TSA: Pyrus x bretschneideri Unigene11403_XinShao mRNA sequence.
JR606449.1:116-135
ACCCCTCACTCTCTCCCTCCCTCCCTCCCT116CCATTTTTCTCTTCTGCAACAAGGTTTTGCTGGAGAAACAAGATAAAAGA
S216P61446RF8.T0 Masuku Pan troglodytes troglodytes STS genomic, sequence tagged site.
BV655054.1:268-287
TTTATAAATATGTATTTGACTATCTAGCAA268CCATTTTTCTCTTCTGCAACTAAAACGCATTCTGTATTAATCTCTGAATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:45035573-45035592
AAAACTTCCAACCTCTCTCTTTCTCTTCCT45035573CCATTTTTCTCTTCTGCAACAGGGTTTTGCTGGAGGAACAAGATAAAAGA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:41318832-41318851
AAAACTTCCAACCTCTCTCTTTCTCTTCCT41318832CCATTTTTCTCTTCTGCAACAGGGTTTTGCTGGAGAAACAAGATAAAAGA
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:45368666-45368685
AAAACTTCCAACCTCTCTCTTTCTCTTCCT45368666CCATTTTTCTCTTCTGCAACAGGGTTTCGCTGGAGGAACAAGATAAAAGA
Malus domestica genome assembly, chromosome: 5.
OU744546.1:44163627-44163646
AAAACTTCCAACCTCTCTCTTTCTCTTCCT44163627CCATTTTTCTCTTCTGCAACAGGGTTTTGCTGGAGGAACAAGATAAAAGA
Malus domestica genome assembly, chromosome: 5.
OU744995.1:45318124-45318143
AAAACTTCCAACCTCTCTCTTTCTCTTCCT45318124CCATTTTTCTCTTCTGCAACAGGGTTTTGCTGGAGGAACAAGATAAAAGA
Lepidonotus clava genome assembly, chromosome: 17.
OW387149.1:2571094-2571113
CTTGTTAACTCGATAGTTTCTTAACATTTT2571094CCATTTTTCTCTTCTGCAACATTATTAGAATACTTGTGAGAATTCAAATA
Maratus speciosus genome assembly, chromosome: 9.
OZ010795.1:541973510-541973529
CATGCTCTGACTATTAAAACAGTAAAAATT541973510CCATTTTTCTCTTCTGCAACCAAAACATACAGAACAAGTACAGAGTTGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTGCAGAAGAGAAAAATGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTGCAGAAGAGAAAAATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGCAGAAGAGAAAAATGG&k=0&no_gap=0&offset=0&limit=50
0.385 | 0.188 | search_minus_done; http://172.18.8.135:50400/match?q=CCATTTTTCTCTTCTGCAAC&k=0&no_gap=0&offset=0&limit=38
0.398 | 0.013 | cgi_end;

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