GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:51:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 3, clone: LjT02H21, TM1296.
AP010591.1:59455-59474
ATGGAATATTTGAATTTGAACCTCTCATTA59455GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT10G09, TM0173a.
AP006095.1:10726-10745
ATATATATATATATATTGTGGATAACTTTA10726GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus genomic DNA, chromosome 6, clone: LjT28D11, TM1650b.
AP009849.1:7964-7983
AATAACATTTAATCCCGGGTCATCACATTA7964GTTGCTCCCCTTGGAATTAGGAGGAATTTTTTGCCATGGTTAAATGATCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:547169-547188
ATGGGATATTTGAATTTGAACCTCTCATTA547169GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:65866163-65866182
ATGGAATATTTGAATTTGAACCTCTCATTA65866163GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:53477992-53478011
ATATATATATATATATTGTGGATAACTTTA53477992GTTGCTCCCCTTGGAATTAGGAGGAATTTTTGGCCATGGATTAATGATCA
Lotus japonicus genomic DNA, chromosome 4, clone: LjB356P07, BM1727.
AP010377.1:11220-11239
TGATCATTAATCCATGGCCAAAAATTCCTC11220CTAATTCCAAGGGGAGCAACTAAAGTTATCCACAATATATATATATATAT
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:64715576-64715595
TGATCATTAATCCATGGCCAAAAATTCCTC64715576CTAATTCCAAGGGGAGCAACTAATGAGAGGTTCAAATTCAAATATCCCAT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:48718860-48718879
TGATCATTTAACCATGGCAAAAAATTCCTC48718860CTAATTCCAAGGGGAGCAACTAATGTGATGACCCGGGATTAAATGTTATT
Lumbricus rubellus genome assembly, chromosome: 4.
OX243814.1:13451907-13451926
TAGAAATAGAATGTATTGGAGTATACAAAC13451907CTAATTCCAAGGGGAGCAACTGATAAAGTAATTATGCTGACTATTGTAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTGCTCCCCTTGGAATTAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTGCTCCCCTTGGAATTAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGCTCCCCTTGGAATTAG&k=0&no_gap=0&offset=0&limit=50
0.110 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=CTAATTCCAAGGGGAGCAAC&k=0&no_gap=0&offset=0&limit=44
0.113 | 0.003 | cgi_end;

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