GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:42:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Camellia sinensis tea_rep_c3685 mRNA sequence.
KA283104.1:522-541
AAGATGATGGCCAAGAGGATATCGATGCAG522GTTGCTGTTGATTCGTCTGACATTTTCACTCACAAACAACTAACTGGACA
EST2449 Tender roots cDNA library of tea plant Camellia sinensis cDNA clone 07102311-CHAG_26_95.M13+_G12.ab1, mRNA sequence.
GE652122.1:181-200
TGTCCAGTTAGTTGTTTGTGAGTGAAAATG181TCAGACGAATCAACAGCAACCTGCATCGATATCCTCTTGGCCATCATCTT
Tea223_2006-02-16_1/Tea223_A04_016_1 Camellia sinensis (tea) cultivar TRI2043 EST library Camellia sinensis cDNA, mRNA sequence.
JK476730.1:185-204
TGTCCAGTTAGTTGTTTGTGAGTGAAAATG185TCAGACGAATCAACAGCAACCTGCATCGATATCCTCTTGGCCATCATCTT
Silvanus unidentatus genome assembly, chromosome: 2.
OZ005758.1:25325027-25325046
TCTTCAGGACTTGCCGCATTTGATGTGTGT25325027TCAGACGAATCAACAGCAACCGCATGTATTATCGGCTGATGATAATATGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTGCTGTTGATTCGTCTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTGCTGTTGATTCGTCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.121 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGCTGTTGATTCGTCTGA&k=0&no_gap=0&offset=0&limit=50
0.295 | 0.174 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGACGAATCAACAGCAAC&k=0&no_gap=0&offset=0&limit=49
0.298 | 0.002 | cgi_end;

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