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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 21:51:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 4, clone: LjT05D12, TM0303.
AP006417.1:74701-74720
GGCGGCGACGATGGCGAGGCCGATCTTGCC74701GTTGGAAACGCTGCCTTCTCCGGTGATGGAGGACATGAAGGAGGAGTTGG
Lotus japonicus mRNA, clone: MR041h03_r, 5' end sequence.
DC599261.1:530-549
CCAACTCCTCCTTCATGTCCTCCATCACCG530GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGC
Lotus japonicus cDNA, clone: LjFL3-018-AC05, 5'-end sequence.
FS324099.1:548-567
CCAACTCCTCCTTCATGTCCTCCATCACCG548GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus cDNA, clone: LjFL1-029-BD10, HTC.
AK336837.1:533-552
CCAACTCCTCCTTCATGTCCTCCATCACCG533GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus genomic DNA, chromosome 4, clone: LjT37C07, TM0664.
AP007499.2:118618-118637
CCAACTCCTCCTTCATGTCCTCCATCACCG118618GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:68368305-68368324
CCAACTCCTCCTTCATGTCCTCCATCACCG68368305GAGAAGGCAGCGTTTCCAACGGCAAGATCGGCCTCGCCATCGTCGCCGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTGGAAACGCTGCCTTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTGGAAACGCTGCCTTCTC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGGAAACGCTGCCTTCTC&k=0&no_gap=0&offset=0&limit=50
0.237 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAAGGCAGCGTTTCCAAC&k=0&no_gap=0&offset=0&limit=49
0.240 | 0.003 | cgi_end;

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