GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:37:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 4, clone: LjB10P09, BM1174.
AP007867.2:24377-24396
TGGTTTTGAAGTTTGAGGAATGTTGTTGTG24377GTTGTCGCTGCCATTCTAAGTTTTTTTTTTTGAGGTTCTTGTCTTTAGCG
Sabethes cyaneus genome assembly, chromosome: 3.
OX030889.1:131232876-131232895
AAATTATCAATGGAGGTCTCATTAGTTGAC131232876GTTGTCGCTGCCATTCTAAGTCTCGTTCCCTTTCGGTCATTTCACTAAGG
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:80338841-80338860
CGCTAAAGACAAGAACCTCAAAAAAAAAAA80338841CTTAGAATGGCAGCGACAACCACAACAACATTCCTCAAACTTCAAAACCA
Chymomyza fuscimana genome assembly, chromosome: 2.
OX465089.1:30577984-30578003
CACGCACACACAGAGAGACTCGAATCCGCG30577984CTTAGAATGGCAGCGACAACAGCAACAGGTAAAACAACCACAAAGCAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTGTCGCTGCCATTCTAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTGTCGCTGCCATTCTAAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.090 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=GTTGTCGCTGCCATTCTAAG&k=0&no_gap=0&offset=0&limit=50
0.105 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=CTTAGAATGGCAGCGACAAC&k=0&no_gap=0&offset=0&limit=48
0.107 | 0.001 | cgi_end;

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