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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:52:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus x domestica NBS-LRR resistance gene-like protein ARGH12 gene, partial cds.
AY369214.1:34-55
GGGGTGGGGAAGACGACCCTAGCTAGATTA34GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:28031574-28031595
GGAGTGGGTAAGACAACCCTAGCTAGATTA28031574GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:28052919-28052940
GGAGTGGGTAAGACAACCCTAGCTAGATTA28052919GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:28064208-28064229
GGAGTGGGTAAGACAACCCTAGCTAGATTA28064208GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:29794397-29794418
GGAGTGGGTAAGACAACCCTAGCTAGATTA29794397GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:29807059-29807080
GGAGTGGGTAAGACAACCCTAGCTAGATTA29807059GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:28260561-28260582
GGAGTGGGTAAGACAACCCTAGCTAGATTA28260561GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:28268904-28268925
GGAGTGGGTAAGACAACCCTAGCTAGATTA28268904GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:28296543-28296564
AGGGATATGGGGGATGGGTGGAGTGGGTAA28296543GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:28332432-28332453
GGAGTGGGTAAGACAACCCTAGCTACATTA28332432GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:28349492-28349513
GGAGTGGGTAAGACAACCCTAGCTAGATTA28349492GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:28375348-28375369
GGAGTGGGTAAGACAACCCTAGCTAGATTA28375348GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141977.1:28260836-28260857
GGAGTGGGTAAGACAACCCTAGCTAGATTA28260836GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:4484099-4484120
GGAGTGGGTAAGACAACCCTAGCTAGATTA4484099GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:20890748-20890769
GGAGTGGGTAAGACAACCCTAGCTAGATTA20890748GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:3642407-3642428
GGAGTGGGTAAGACAACCCTAGCTAGATTA3642407GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:19964810-19964831
GGAGTGGGTAAGACAACCCTAGCTAGATTA19964810GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:3920342-3920363
GGAGTGGGTAAGACAACCCTAGCTAGATTA3920342GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:3928929-3928950
GGAGTGGGTAAGACAACCCTAGCTAGATTA3928929GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:20185726-20185747
GGAGTGGGTAAGACAACCCTAGCTAGATTA20185726GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:20290242-20290263
GGAGTGGGTAAGACAACCCTAGCTAGATTA20290242GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus domestica genome assembly, chromosome: 5.
OU744546.1:3570439-3570460
GGAGTGGGTAAGACAACCCTAGCTAGATTA3570439GTTTACGAGAGAATTTCTCATGGTTTTGAAGGTAGCAGTTTTCTTGCTAATG
Malus domestica genome assembly, chromosome: 5.
OU744546.1:20504118-20504139
GGAGTGGGTAAGACAACCCTAGCTAGATTA20504118GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus domestica genome assembly, chromosome: 5.
OU744957.1:3924230-3924251
GGAGTGGGTAAGACAACCCTAGCTAGATTA3924230GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus domestica genome assembly, chromosome: 5.
OU744957.1:20456971-20456992
GGAGTGGGTAAGACAACCCTAGCTAGATTA20456971GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus domestica genome assembly, chromosome: 5.
OU744995.1:21646669-21646690
GGAGTGGGTAAGACAACCCTAGCTAGATTA21646669GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Malus domestica genome assembly, chromosome: 5.
OU744995.1:21747396-21747417
GGAGTGGGTAAGACAACCCTAGCTAGATTA21747396GTTTACGAGAGAATTTCTCATGATTTTGAAGGTAGCAGCTTTCTTGCTAATG
Pyrus communis partial gene for putative nucleotide binding site leucine-rich repeat disease resistance protein, clone RGA15.
AJ581782.1:462-483
CATTAGCCAGAAAGCTGCTACCTTCAAAAT462CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTTTTCCCCACTCC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:24918617-24918638
CATTAGCAAGAAAGCTGCTACCTTCAAAAT24918617CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:25019301-25019322
CATTAGCAAGAAAGCTGCTACCTTCAAAAT25019301CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:42827986-42828007
CATTAGCAAGAAAGCTGCTACCTTCAAAAT42827986CATGAGAAATTCTCTCGTAAACTAATCTATCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:25590843-25590864
CATTAGCAAGAAAGCTGCTACCTTCAAAAT25590843CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:24512622-24512643
CATTAGCAAGAAAGCTGCTACCTTCAAAAT24512622CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:24613333-24613354
CATTAGCAAGAAAGCTGCTACCTTCAAAAT24613333CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:41590225-41590246
CATTAGCAAGAAAGCTGCTACCTTCAAAAT41590225CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:25920685-25920706
CATTAGCAAGAAAGCTGCTACCTTCAAAAT25920685CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:26021396-26021417
CATTAGCAAGAAAGCTGCTACCTTCAAAAT26021396CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:43008950-43008971
CATTAGCAAGAAAGCTGCTACCTTCAAAAT43008950CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:1529536-1529557
CATTAGCAAGAAAGCAGCTACCTTCAAAAT1529536CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:1440272-1440293
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1440272CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:1452517-1452538
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1452517CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:1532430-1532451
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1532430CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:1547727-1547748
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1547727CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:1561861-1561882
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1561861CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus domestica genome assembly, chromosome: 8.
OU696684.1:1493621-1493642
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1493621CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus domestica genome assembly, chromosome: 5.
OU744546.1:3541731-3541752
CATTAGCAAGAAAACTGCTACCTTCAAAAC3541731CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus domestica genome assembly, chromosome: 8.
OU744549.1:1559798-1559819
CATTAGCAAGAAAGCAGCTACCTTCAAAAT1559798CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus domestica genome assembly, chromosome: 8.
OU744960.1:1551507-1551528
CATTAGCAAGAAAGCAGCTACCTTCAAAAT1551507CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus domestica genome assembly, chromosome: 8.
OU744998.1:1573808-1573829
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1573808CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus domestica genome assembly, chromosome: 8.
OU744998.1:1587764-1587785
CATTAGCAAGAAAGCAGCTACCTTCAAAAT1587764CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:41900675-41900696
CATTAGCAAGAAAGCTGCTACCTTCAAAAT41900675CATGAGAAATTCTCTCGTAAACTAATCTATCTAGGGTTGTCTTACCCACTCC
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:1512399-1512420
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1512399CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:1523688-1523709
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1523688CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:1545074-1545095
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1545074CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:1554909-1554930
CATTAGCAAGAAAGCTGCTACCTTCAAAAT1554909CATGAGAAATTCTCTCGTAAACTAATCTAGCTAGGGTTGTCTTACCCACTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTTACGAGAGAATTTCTCATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTTACGAGAGAATTTCTCATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.287 | 0.278 | search_plus_done; http://172.18.8.135:50400/match?q=GTTTACGAGAGAATTTCTCATG&k=0&no_gap=0&offset=0&limit=50
0.393 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=CATGAGAAATTCTCTCGTAAAC&k=0&no_gap=0&offset=0&limit=23
0.412 | 0.018 | cgi_end;

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