GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 20:42:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

WS00910.B21_O19 IS-B-N-A-10 Picea engelmannii x Picea glauca cDNA clone WS00910_O19 3', mRNA sequence.
CO206353.1:330-349
ATATTTGACTGAGCTTCTACATACTGATCT330GTTTGATTTACAACACCATTAGCCGTGGGCGTGGGCGTGGGCGTGGGCGT
WS00812.B21_M15 WS-X-N-A-9 Picea glauca cDNA clone WS00812_M15 3', mRNA sequence.
CO251088.1:328-347
ATATTTGACTGAGCTTCTACATACTGATCT328GTTTGATTTACAACACCATTAGCCGTGGGCGTGGGCGTGGGCGTTGGCGT
GQ0252.B7_P22 GQ025: Annual flush SHOOTS diurnal cycle- trees Picea glauca cDNA clone GQ0252_P22 3', mRNA sequence.
CO487785.2:272-291
ATATTTGACTGAGCTTCTACATACTGATCT272GTTTGATTTACAACACCATTAGCCGTGGGCGTGGGCGTGGGCGTGGGCGT
WS0328.C21_P06 WS-MC-N-A-20 Picea glauca cDNA clone WS0328_P06 3, mRNA sequence.
DR556514.1:328-347
ATATTTGACTGAGCTTCTACATACTGATCT328GTTTGATTTACAACACCATTAGCCGTGGGCGTGGGCGTGGGCGTGGGCGT
Persicaria maculosa genome assembly, chromosome: 6.
OY998256.1:41381828-41381847
ACACTTTTCATCTATAATCTGATGTTTTTC41381828GTTTGATTTACAACACCATTTGCTCATGAAATAAGATTTTGCAAATGATG
Clostridium scatologenes strain ATCC 25775, complete genome.
CP009933.1:2152773-2152792
AACTGCTTACTCACATCTAATAATTCACGT2152773GTTTGATTTACAACACCATTTGCTATTTCTTCAACTGCTGTTGCCACTTG
Hydriomena furcata genome assembly, chromosome: 24.
OU538843.1:4529023-4529042
TCCATGACCAAGTTGTAAACAGAAGTTGAT4529023GTTTGATTTACAACACCATTATTTAGTGACTTACTGTGCCGCGCATGTGT
Agriopis aurantiaria genome assembly, chromosome: 10.
OU611991.1:2287470-2287489
CCGGCATGGATTGTCGGGTAGACGGCTGTA2287470GTTTGATTTACAACACCATTCCTTCCTGACGCTCCACGCGGGACGGACGT
Agriopis marginaria genome assembly, chromosome: 9.
OW029923.1:2621252-2621271
CCGGCATGGATTGTCGGGTAGACGGCTGTA2621252GTTTGATTTACAACACCATTTCTTCCTGACGCTCCACGCGGGACGGACGT
Eudonia lacustrata genome assembly, chromosome: 7.
OX387315.1:5171741-5171760
AACCCGTCATGATTTTCATGGTAAAAAAAT5171741GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATACATCAT
Eudonia lacustrata genome assembly, chromosome: 14.
OX387322.1:21253906-21253925
AACCCGTCATGATTTTCATGGTAAAAAAAT21253906GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATACAACAT
Eudonia lacustrata genome assembly, chromosome: 18.
OX387326.1:71710-71729
AACCCGTCATGATTTTCATGGTAAAAAAAT71710GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATACATCAT
Eudonia lacustrata genome assembly, chromosome: 18.
OX387326.1:6068500-6068519
AACCCGTCATGATTTTCATGGTAAAAAAAT6068500GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATACAACAT
Eudonia lacustrata genome assembly, chromosome: 21.
OX387329.1:574144-574163
CAACCCGTCATGATTTTCATGGAAAAAAAT574144GTTTGATTTACAACACCATTCCCGTACATTTAATAAAAATCATACATCAT
Eudonia lacustrata genome assembly, chromosome: 29.
OX387337.1:12146039-12146058
AACCCGTCATGATTTTCATGGTAAAAAAAT12146039GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATACAACAT
Eudonia lacustrata genome assembly, chromosome: Z.
OX387339.1:17519446-17519465
AACCCGTCATGATTTTCATGGTAAAAAAAT17519446GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATGAAATTT
Eudonia lacustrata genome assembly, chromosome: 1.
OX387340.1:29170292-29170311
AACCCGTCATGATTTTCATGGTAAAAAAAT29170292GTTTGATTTACAACACCATTCCCGTACATTTAATGAAAATCATACATCAT
Cydia strobilella genome assembly, chromosome: 9.
OX387684.1:11708150-11708169
CAGTTAATGTACGTATTGTAAACATGACTC11708150GTTTGATTTACAACACCATTTTTTCTTATATTATTGCCATGAGCACGCAC
Apocheima hispidaria genome assembly, chromosome: 10.
OX388154.1:1785483-1785502
CCGGCACGGATTGTCGGGTAGACGGCTGTA1785483GTTTGATTTACAACACCATTCCTTCCTGACGCTCCACGCGGGACGGACGT
Eudonia mercurella genome assembly, chromosome: 19.
OY720041.1:7369583-7369602
GATGTGTGAATGATTTTCATGTAAAAAAAT7369583GTTTGATTTACAACACCATTCCGAAAATTATACATCATTACGTATTCCTG
Eudonia mercurella genome assembly, chromosome: 21.
OY720043.1:2646292-2646311
AACCCGTCATGATTTTCATATAAAAAATAT2646292GTTTGATTTACAACACCATTCCGAAAATCATACATCATTACGTATTCCTG
Eudonia mercurella genome assembly, chromosome: 25.
OY720047.1:7942826-7942845
AACCCGTCATGATTTTCATATAAAAAATAT7942826GTTTGATTTACAACACCATTCCGAAATTCATACATCATTACGTATTCCTG
Aporrectodea icterica genome assembly, chromosome: 7.
OY744608.1:61459697-61459716
ATTTCTGTTTGATCTACAGACACCATTTGC61459697GTTTGATTTACAACACCATTTCTGTTTGGTTTACAGACACCATTTCTGTT
Aporrectodea icterica genome assembly, chromosome: 7.
OY744608.1:61460223-61460242
ATTTCTGTTGGATTTACAGACACCATTTGT61460223GTTTGATTTACAACACCATTTCTGTTGGATTTACAGACACCATTTCTGTT
Aporrectodea icterica genome assembly, chromosome: 7.
OY744608.1:61461066-61461085
GTTTCTGTTTGATTTACAGACACCATTTGC61461066GTTTGATTTACAACACCATTTCTGTTTGGTTTACAGACACCATTTCTGTT
Aporrectodea icterica genome assembly, chromosome: 7.
OY744608.1:61463813-61463832
ATTTCTGTTGAATTTACAGATACCATTTGC61463813GTTTGATTTACAACACCATTTGTGTTTGATCTGCAGACACCATTTGTGTT
Picea glauca clone GQ0252_P22 mRNA sequence.
BT103441.1:358-377
ACGCCCACGCCCACGCCCACGCCCACGGCT358AATGGTGTTGTAAATCAAACAGATCAGTATGTAGAAGCTCAGTCAAATAT
Clostridium drakei strain SL1 chromosome, complete genome.
CP020953.1:2139532-2139551
CAAGTGGCAACAGCAGTTGAAGAAATAGCA2139532AATGGTGTTGTAAATCAAACACGTGAATTATTAGATGTGAGTAAGCAATT
Peribatodes rhomboidaria genome assembly, chromosome: 9.
OU452175.1:15495381-15495400
ACGTCCGTCCCGCGTGGAGCGTCAGGAAGG15495381AATGGTGTTGTAAATCAAACTACACCCGTCTACCCGACAATCCGTGCCGG
Eudonia lacustrata genome assembly, chromosome: 7.
OX387315.1:18701869-18701888
ATGATGTATGATTTTCATTAAATGTACGGG18701869AATGGTGTTGTAAATCAAACATTTTTTTACCATGAAAATCATGACGGGTT
Eudonia lacustrata genome assembly, chromosome: 15.
OX387323.1:20819436-20819455
ATGATGTATGATTTTCATTAAATGTACGGG20819436AATGGTGTTGTAAATCAAACATTTTTTTACCATGAAAATCATGACGGGTT
Eudonia lacustrata genome assembly, chromosome: 19.
OX387327.1:20090401-20090420
ATGTTGTATGATTTTCATTAAATGTACGGG20090401AATGGTGTTGTAAATCAAACATTTTTTTACCATGAAAATCATGACGGGTT
Lycia hirtaria genome assembly, chromosome: 5.
OX387379.1:8095901-8095920
GCGTCCGTCCCGCGTTGAGCGTCAGGAAGG8095901AATGGTGTTGTAAATCAAACTACAGACGTCTACCCGACAATCCGTGCCGG
Alcis repandata genome assembly, chromosome: 11.
OX421232.1:11937208-11937227
ACGTCCGTCCCGCGTGGAGCGTCAGGAAGG11937208AATGGTGTTGTAAATCAAACTACAGCCGTCTACCCGACAATCCGTGCCGG
Agriopis leucophaearia genome assembly, chromosome: 9.
OX421270.1:16120533-16120552
ACGTCCGTCCCGCGTGGAGCATCAGGAAGG16120533AATGGTGTTGTAAATCAAACTACAGCCGTCTACCCGACAATCCATGCCGG
Eudonia mercurella genome assembly, chromosome: 13.
OY720035.1:6222535-6222554
CAGGAATACGTAATGATGTATGATTTTCGG6222535AATGGTGTTGTAAATCAAACATATTTTTTATATGAAAATCATGACGGGTT
Eudonia mercurella genome assembly, chromosome: 14.
OY720036.1:13542834-13542853
CAGGAATACGTAATGATGTATGATTTTCGG13542834AATGGTGTTGTAAATCAAACATATTTTTTATATGAAAATCATGACGGGTT
Eudonia mercurella genome assembly, chromosome: 18.
OY720040.1:11049207-11049226
CAGGAATACGTAATGATGTATGATTTTCGG11049207AATGGTGTTGTAAATCAAACATATTTTTTATATGAAAATCATGACGGGTT
Ectropis crepuscularia genome assembly, chromosome: 8.
OY856346.1:2262315-2262334
GCGTCCGTCCCGCGCGGAGCGTCAGGAAGG2262315AATGGTGTTGTAAATCAAACTACAGCCGTCTGAGCCGTCTACCCGACAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GTTTGATTTACAACACCATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTTGATTTACAACACCATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.496 | 0.487 | search_plus_done; http://172.18.8.135:50400/match?q=GTTTGATTTACAACACCATT&k=0&no_gap=0&offset=0&limit=50
0.645 | 0.149 | search_minus_done; http://172.18.8.135:50400/match?q=AATGGTGTTGTAAATCAAAC&k=0&no_gap=0&offset=0&limit=24
0.653 | 0.008 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).