GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 14:38:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Camellia sinensis Singletons36915.Casi mRNA sequence.
HP749771.1:706-728
GTTTTCTGGATTAAGTTTTTTGAAAATTAA706GTTTTTTGGTTTTCGTATTTTTTTATTTTT
Camellia sinensis caffeine synthase gene, complete cds.
EF526217.1:1048-1070
ATTTTTTGAATTAAGTTTTTTGAAAACTGA1048GTTTTTTGGTTTTCGTATTTTTTTTGTTTTTAGTGGGTATTTTTAAAATTTTA
Camellia sinensis caffeine synthase 1 (TCS1) gene, complete cds.
JX647690.1:1505-1527
ATTTTTTGAATTAAGTTTTTTGAAAACTGA1505GTTTTTTGGTTTTCGTATTTTTTTTTGTTTTTAGTGGGTATTTTTAAAATTTT
Fissipunctia ypsillon genome assembly, chromosome: 11.
OX387654.1:14471955-14471977
TACTTGGTTGTACTTGTTTACAGCGGCCCA14471955GTTTTTTGGTTTTCGTATTTTTTGATTATATATTGATATAATAACTTATAAAA
Terebella lapidaria genome assembly, chromosome: 4.
OX424558.1:31043638-31043660
AAAAATAATTCAAGAAGGAGGTATTTTTTA31043638GTTTTTTGGTTTTCGTATTTTTTTCAAAATGGCGCCCGTTTTCGACGAAAAAT
Dolichopus griseipennis genome assembly, chromosome: 2.
OY720442.1:133317247-133317269
TGTTTTCATTCTTTGATTAATTTGACTTTT133317247GTTTTTTGGTTTTCGTATTTTTTTTTTAATAATTTTAGTTAATAATTATGGGT
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737655.1:512756727-512756749
GTCAACTTTTTATTCTCTCCCGAACCTCGA512756727AAAAAATACGAAAACCAAAAAACCAAGAAAAATCATATAATATCCTTAAATGC
Agonopterix alstromeriana genome assembly, chromosome: 23.
OZ004684.1:3052607-3052629
ACTTTATATAACTCTCAAACATAAACAGAC3052607AAAAAATACGAAAACCAAAAAACAAAGCGGTCTTATCGCTAAGAAGCAAATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GTTTTTTGGTTTTCGTATTTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GTTTTTTGGTTTTCGTATTTTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.098 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=GTTTTTTGGTTTTCGTATTTTTT&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAAATACGAAAACCAAAAAAC&k=0&no_gap=0&offset=0&limit=44
0.117 | 0.001 | cgi_end;

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