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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:39:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Nannobrachium achirus genome assembly, chromosome: 18.
OY997655.1:40876609-40876628
GATTAATCTTCATTGATCCTCCATTAAAGA40876609TAAAACCAAATCGGAAACGCCATAATACAGACACACACACATGCACATGC
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:12281787-12281806
CAAGAACGCCTATCTATTCGAGAGGAACCC12281787TAAAACCAAATCGGAAACGCAGAACGGTGGGCTCTAGCCAAGCAAGGGAA
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:12298713-12298732
CAAGAACGCCTATCTATTCGAGAGGAACCC12298713TAAAACCAAATCGGAAACGCAGAACGGTGGGCTCTAGCCAAGCAAGGGGA
Trichormus variabilis NIES-23 DNA, nearly complete genome.
AP018216.1:3102703-3102722
CGGCCAATCTTCTAGTAATCCCTCTTCATC3102703TAAAACCAAATCGGAAACGCCTTGGAAATAGGAATCGATAGTTTGTTGCT
Nostoc sp. PCC 7120 DNA, complete genome.
BA000019.2:4996271-4996290
CGGCCAATCTTCTAGTAATCCCTCTTCATC4996271TAAAACCAAATCGGAAACGCCTTGGAAATAGGAATCGATAGTTTGTTGCT
Gari tellinella genome assembly, chromosome: 6.
OV277861.1:2345914-2345933
ATTTTGTCGGCTATATTGCTTGCCCATATC2345914TAAAACCAAATCGGAAACGCTTTTTGCGATGACGTAAGAAGGTCGCACGC
Rhingia campestris genome assembly, chromosome: 1.
OW052182.1:68443377-68443396
AAAATATTTGCGTGCCTTAAACATTTAAAT68443377TAAAACCAAATCGGAAACGCATTTATACTTACGGCTTCTTCCATTTTATT
RE29484.5prime RE Drosophila melanogaster normalized Embryo pFlc-1 Drosophila melanogaster cDNA clone RE29484 5 similar to CG13610: FBan0013610 'transporter' located on: 3R 95F2-95F2;: 04/12/2001, mRN
BI233195.1:281-300
GACATCACGAGATTGTGCCAAAAAAGCATA281GCGTTTCCGATTTGGTTTTATTATACCGGCGCCACTCGACGAAGTCAGTT
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:30778900-30778919
TCCCCTTTCTTGGCTAGTGCCCACCGTTCT30778900GCGTTTCCGATTTGGTTTTAGGGTTCCTTTCGAATAGATAGACGTTCTTG
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:34487764-34487783
TCCCCTTTCTTGGCTAGTGCCCACCGTTCT34487764GCGTTTCCGATTTGGTTTTAGGGTTCCTTTCGAATAGATAGACGTTCTTG
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:31469435-31469454
TCCCCTTTCTTGGCTAGTGCCCACCGTTCT31469435GCGTTTCCGATTTGGTTTTAGGGTTCCTTTCGAATAGATAGACGTTCTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAAAACCAAATCGGAAACGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAAACCAAATCGGAAACGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.173 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=TAAAACCAAATCGGAAACGC&k=0&no_gap=0&offset=0&limit=50
0.269 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTTTCCGATTTGGTTTTA&k=0&no_gap=0&offset=0&limit=43
0.271 | 0.003 | cgi_end;

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